Gene : Potri.003G028500 P. trichocarpa v3.0
Defline:  (1 of 5) PF04683 - Proteasome complex subunit Rpn13 ubiquitin receptor (Proteasom_Rpn13) Genomic Order:  285
Name:  ? Potri.003G028500 Secondary Identifier:  ? PAC:26998276
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G028500 0.5kb upstream 0.5kb upstream 2119   true Chr03: 3550469-3552587 Populus trichocarpa
Potri.003G028500 0.5kb upstream 0.5kb upstream 500   false Chr03: 3552088-3552587 Populus trichocarpa
Potri.003G028500 0.5kb downstream 0.5kb downstream 2119   true Chr03: 3549969-3552087 Populus trichocarpa
Potri.003G028500 0.5kb downstream 0.5kb downstream 500   false Chr03: 3549969-3550468 Populus trichocarpa
Potri.003G028500 1.0kb upstream 1.0kb upstream 2619   true Chr03: 3550469-3553087 Populus trichocarpa
Potri.003G028500 1.0kb upstream 1.0kb upstream 1000   false Chr03: 3552088-3553087 Populus trichocarpa
Potri.003G028500 1.0kb downstream 1.0kb downstream 2619   true Chr03: 3549469-3552087 Populus trichocarpa
Potri.003G028500 1.0kb downstream 1.0kb downstream 1000   false Chr03: 3549469-3550468 Populus trichocarpa
Potri.003G028500 2.0kb upstream 2.0kb upstream 3619   true Chr03: 3550469-3554087 Populus trichocarpa
Potri.003G028500 2.0kb upstream 2.0kb upstream 2000   false Chr03: 3552088-3554087 Populus trichocarpa
Potri.003G028500 2.0kb downstream 2.0kb downstream 3619   true Chr03: 3548469-3552087 Populus trichocarpa
Potri.003G028500 2.0kb downstream 2.0kb downstream 2000   false Chr03: 3548469-3550468 Populus trichocarpa
Potri.003G028500 5.0kb upstream 5.0kb upstream 6619   true Chr03: 3550469-3557087 Populus trichocarpa
Potri.003G028500 5.0kb upstream 5.0kb upstream 5000   false Chr03: 3552088-3557087 Populus trichocarpa
Potri.003G028500 5.0kb downstream 5.0kb downstream 6619   true Chr03: 3545469-3552087 Populus trichocarpa
Potri.003G028500 5.0kb downstream 5.0kb downstream 5000   false Chr03: 3545469-3550468 Populus trichocarpa
Potri.003G028500 10.0kb upstream 10.0kb upstream 11619   true Chr03: 3550469-3562087 Populus trichocarpa
Potri.003G028500 10.0kb upstream 10.0kb upstream 10000   false Chr03: 3552088-3562087 Populus trichocarpa
Potri.003G028500 10.0kb downstream 10.0kb downstream 11619   true Chr03: 3540469-3552087 Populus trichocarpa
Potri.003G028500 10.0kb downstream 10.0kb downstream 10000   false Chr03: 3540469-3550468 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.044     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.059     Low High
cufflinks 0.027     Low  
cufflinks 0.013     Low  
cufflinks 0.003     Low Low
cufflinks 0.03     Low  
cufflinks 0.106     Low High
cufflinks 0.002     Low Low
cufflinks 0.005     Low  
cufflinks 0.018     Low  
cufflinks 0.019     Low  
cufflinks 0.011     Low  
cufflinks 0.019     Low  
cufflinks 0.003     Low Low
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low  
cufflinks 0.027     Low  
cufflinks 0.023     Low  
cufflinks 0.002     Low Low
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.056     Low  
cufflinks 0.055     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain