Gene : Potri.003G186900 P. trichocarpa v3.0
Defline:  (1 of 1) 2.5.1.46 - Deoxyhypusine synthase / Spermidine dehydrogenase Genomic Order:  1869
Name:  ? Potri.003G186900 Secondary Identifier:  ? PAC:26996453
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5905 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G186900 0.5kb upstream 0.5kb upstream 4199   true Chr03: 19285094-19289292 Populus trichocarpa
Potri.003G186900 0.5kb upstream 0.5kb upstream 500   false Chr03: 19285094-19285593 Populus trichocarpa
Potri.003G186900 0.5kb downstream 0.5kb downstream 4199   true Chr03: 19285594-19289792 Populus trichocarpa
Potri.003G186900 0.5kb downstream 0.5kb downstream 500   false Chr03: 19289293-19289792 Populus trichocarpa
Potri.003G186900 1.0kb upstream 1.0kb upstream 4699   true Chr03: 19284594-19289292 Populus trichocarpa
Potri.003G186900 1.0kb upstream 1.0kb upstream 1000   false Chr03: 19284594-19285593 Populus trichocarpa
Potri.003G186900 1.0kb downstream 1.0kb downstream 4699   true Chr03: 19285594-19290292 Populus trichocarpa
Potri.003G186900 1.0kb downstream 1.0kb downstream 1000   false Chr03: 19289293-19290292 Populus trichocarpa
Potri.003G186900 2.0kb upstream 2.0kb upstream 5699   true Chr03: 19283594-19289292 Populus trichocarpa
Potri.003G186900 2.0kb upstream 2.0kb upstream 2000   false Chr03: 19283594-19285593 Populus trichocarpa
Potri.003G186900 2.0kb downstream 2.0kb downstream 5699   true Chr03: 19285594-19291292 Populus trichocarpa
Potri.003G186900 2.0kb downstream 2.0kb downstream 2000   false Chr03: 19289293-19291292 Populus trichocarpa
Potri.003G186900 5.0kb upstream 5.0kb upstream 8699   true Chr03: 19280594-19289292 Populus trichocarpa
Potri.003G186900 5.0kb upstream 5.0kb upstream 5000   false Chr03: 19280594-19285593 Populus trichocarpa
Potri.003G186900 5.0kb downstream 5.0kb downstream 8699   true Chr03: 19285594-19294292 Populus trichocarpa
Potri.003G186900 5.0kb downstream 5.0kb downstream 5000   false Chr03: 19289293-19294292 Populus trichocarpa
Potri.003G186900 10.0kb upstream 10.0kb upstream 13699   true Chr03: 19275594-19289292 Populus trichocarpa
Potri.003G186900 10.0kb upstream 10.0kb upstream 10000   false Chr03: 19275594-19285593 Populus trichocarpa
Potri.003G186900 10.0kb downstream 10.0kb downstream 13699   true Chr03: 19285594-19299292 Populus trichocarpa
Potri.003G186900 10.0kb downstream 10.0kb downstream 10000   false Chr03: 19289293-19299292 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.04       High
cufflinks 3.624        
cufflinks 3.908        
cufflinks 3.215        
cufflinks 4.551        
cufflinks 3.63        
cufflinks 4.22        
cufflinks 2.9       Low
cufflinks 3.014       Low
cufflinks 5.777       High
cufflinks 4.035        
cufflinks 3.389        
cufflinks 4.326        
cufflinks 4.392        
cufflinks 3.648        
cufflinks 5.323       High
cufflinks 2.988       Low
cufflinks 2.699       Low
cufflinks 2.781       Low
cufflinks 3.924        
cufflinks 3.688        
cufflinks 4.942       High
cufflinks 4.503        
cufflinks 4.48        
cufflinks 6.477        
cufflinks 6.266        
cufflinks 6.762        
cufflinks 8.824        
cufflinks 9.813       High
cufflinks 6.702        

0 Strain