Gene : Potri.003G107000 P. trichocarpa v3.0
Defline:  (1 of 3) K08343 - ubiquitin-like-conjugating enzyme ATG3 (ATG3) Genomic Order:  1070
Name:  ? Potri.003G107000 Secondary Identifier:  ? PAC:26999577
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G107000 0.5kb upstream 0.5kb upstream 5133   true Chr03: 13099439-13104571 Populus trichocarpa
Potri.003G107000 0.5kb upstream 0.5kb upstream 500   false Chr03: 13099439-13099938 Populus trichocarpa
Potri.003G107000 0.5kb downstream 0.5kb downstream 5133   true Chr03: 13099939-13105071 Populus trichocarpa
Potri.003G107000 0.5kb downstream 0.5kb downstream 500   false Chr03: 13104572-13105071 Populus trichocarpa
Potri.003G107000 1.0kb upstream 1.0kb upstream 5633   true Chr03: 13098939-13104571 Populus trichocarpa
Potri.003G107000 1.0kb upstream 1.0kb upstream 1000   false Chr03: 13098939-13099938 Populus trichocarpa
Potri.003G107000 1.0kb downstream 1.0kb downstream 5633   true Chr03: 13099939-13105571 Populus trichocarpa
Potri.003G107000 1.0kb downstream 1.0kb downstream 1000   false Chr03: 13104572-13105571 Populus trichocarpa
Potri.003G107000 2.0kb upstream 2.0kb upstream 6633   true Chr03: 13097939-13104571 Populus trichocarpa
Potri.003G107000 2.0kb upstream 2.0kb upstream 2000   false Chr03: 13097939-13099938 Populus trichocarpa
Potri.003G107000 2.0kb downstream 2.0kb downstream 6633   true Chr03: 13099939-13106571 Populus trichocarpa
Potri.003G107000 2.0kb downstream 2.0kb downstream 2000   false Chr03: 13104572-13106571 Populus trichocarpa
Potri.003G107000 5.0kb upstream 5.0kb upstream 9633   true Chr03: 13094939-13104571 Populus trichocarpa
Potri.003G107000 5.0kb upstream 5.0kb upstream 5000   false Chr03: 13094939-13099938 Populus trichocarpa
Potri.003G107000 5.0kb downstream 5.0kb downstream 9633   true Chr03: 13099939-13109571 Populus trichocarpa
Potri.003G107000 5.0kb downstream 5.0kb downstream 5000   false Chr03: 13104572-13109571 Populus trichocarpa
Potri.003G107000 10.0kb upstream 10.0kb upstream 14633   true Chr03: 13089939-13104571 Populus trichocarpa
Potri.003G107000 10.0kb upstream 10.0kb upstream 10000   false Chr03: 13089939-13099938 Populus trichocarpa
Potri.003G107000 10.0kb downstream 10.0kb downstream 14633   true Chr03: 13099939-13114571 Populus trichocarpa
Potri.003G107000 10.0kb downstream 10.0kb downstream 10000   false Chr03: 13104572-13114571 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.934        
cufflinks 3.034        
cufflinks 4.774       High
cufflinks 2.979        
cufflinks 4.038        
cufflinks 2.721        
cufflinks 2.074       Low
cufflinks 3.399        
cufflinks 2.525        
cufflinks 1.772       Low
cufflinks 4.355       High
cufflinks 2.905        
cufflinks 4.075        
cufflinks 4.301       High
cufflinks 2.811        
cufflinks 4.281        
cufflinks 4.117        
cufflinks 4.193        
cufflinks 2.622        
cufflinks 3.876        
cufflinks 1.899       Low
cufflinks 2.632        
cufflinks 2.601        
cufflinks 4.222        
cufflinks 17.395        
cufflinks 17.501        
cufflinks 20.598       High
cufflinks 17.546        
cufflinks 15.822        
cufflinks 18.889        

0 Strain