Gene : Potri.003G126600 P. trichocarpa v3.0
Defline:  (1 of 1) PTHR10694//PTHR10694:SF8 - JUMONJI DOMAIN CONTAINING PROTEIN // LYSINE-SPECIFIC DEMETHYLASE LID Genomic Order:  1266
Name:  ? Potri.003G126600 Secondary Identifier:  ? PAC:26998428
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G126600 0.5kb upstream 0.5kb upstream 16776   true Chr03: 14730436-14747211 Populus trichocarpa
Potri.003G126600 0.5kb upstream 0.5kb upstream 500   false Chr03: 14730436-14730935 Populus trichocarpa
Potri.003G126600 0.5kb downstream 0.5kb downstream 16776   true Chr03: 14730936-14747711 Populus trichocarpa
Potri.003G126600 0.5kb downstream 0.5kb downstream 500   false Chr03: 14747212-14747711 Populus trichocarpa
Potri.003G126600 1.0kb upstream 1.0kb upstream 17276   true Chr03: 14729936-14747211 Populus trichocarpa
Potri.003G126600 1.0kb upstream 1.0kb upstream 1000   false Chr03: 14729936-14730935 Populus trichocarpa
Potri.003G126600 1.0kb downstream 1.0kb downstream 17276   true Chr03: 14730936-14748211 Populus trichocarpa
Potri.003G126600 1.0kb downstream 1.0kb downstream 1000   false Chr03: 14747212-14748211 Populus trichocarpa
Potri.003G126600 2.0kb upstream 2.0kb upstream 18276   true Chr03: 14728936-14747211 Populus trichocarpa
Potri.003G126600 2.0kb upstream 2.0kb upstream 2000   false Chr03: 14728936-14730935 Populus trichocarpa
Potri.003G126600 2.0kb downstream 2.0kb downstream 18276   true Chr03: 14730936-14749211 Populus trichocarpa
Potri.003G126600 2.0kb downstream 2.0kb downstream 2000   false Chr03: 14747212-14749211 Populus trichocarpa
Potri.003G126600 5.0kb upstream 5.0kb upstream 21276   true Chr03: 14725936-14747211 Populus trichocarpa
Potri.003G126600 5.0kb upstream 5.0kb upstream 5000   false Chr03: 14725936-14730935 Populus trichocarpa
Potri.003G126600 5.0kb downstream 5.0kb downstream 21276   true Chr03: 14730936-14752211 Populus trichocarpa
Potri.003G126600 5.0kb downstream 5.0kb downstream 5000   false Chr03: 14747212-14752211 Populus trichocarpa
Potri.003G126600 10.0kb upstream 10.0kb upstream 26276   true Chr03: 14720936-14747211 Populus trichocarpa
Potri.003G126600 10.0kb upstream 10.0kb upstream 10000   false Chr03: 14720936-14730935 Populus trichocarpa
Potri.003G126600 10.0kb downstream 10.0kb downstream 26276   true Chr03: 14730936-14757211 Populus trichocarpa
Potri.003G126600 10.0kb downstream 10.0kb downstream 10000   false Chr03: 14747212-14757211 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.663        
cufflinks 0.634        
cufflinks 0.461       Low
cufflinks 0.512       Low
cufflinks 0.473       Low
cufflinks 1.527       High
cufflinks 0.689        
cufflinks 0.667        
cufflinks 0.882        
cufflinks 0.983        
cufflinks 0.88        
cufflinks 0.627        
cufflinks 0.801        
cufflinks 0.956        
cufflinks 0.659        
cufflinks 0.711        
cufflinks 1.681       High
cufflinks 1.484       High
cufflinks 0.653        
cufflinks 0.468       Low
cufflinks 0.776        
cufflinks 0.68        
cufflinks 0.586        
cufflinks 1.098       High
cufflinks 11.361        
cufflinks 12.143        
cufflinks 13.177       High
cufflinks 12.144        
cufflinks 11.276        
cufflinks 11.687        

0 Strain