Gene : Potri.003G077100 P. trichocarpa v3.0
Defline:  (1 of 2) KOG1913 - Regucalcin gene promoter region-related protein (RGPR) Genomic Order:  771
Name:  ? Potri.003G077100 Secondary Identifier:  ? PAC:26999095
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G077100 0.5kb upstream 0.5kb upstream 9134   true Chr03: 10545974-10555107 Populus trichocarpa
Potri.003G077100 0.5kb upstream 0.5kb upstream 500   false Chr03: 10554608-10555107 Populus trichocarpa
Potri.003G077100 0.5kb downstream 0.5kb downstream 9134   true Chr03: 10545474-10554607 Populus trichocarpa
Potri.003G077100 0.5kb downstream 0.5kb downstream 500   false Chr03: 10545474-10545973 Populus trichocarpa
Potri.003G077100 1.0kb upstream 1.0kb upstream 9634   true Chr03: 10545974-10555607 Populus trichocarpa
Potri.003G077100 1.0kb upstream 1.0kb upstream 1000   false Chr03: 10554608-10555607 Populus trichocarpa
Potri.003G077100 1.0kb downstream 1.0kb downstream 9634   true Chr03: 10544974-10554607 Populus trichocarpa
Potri.003G077100 1.0kb downstream 1.0kb downstream 1000   false Chr03: 10544974-10545973 Populus trichocarpa
Potri.003G077100 2.0kb upstream 2.0kb upstream 10634   true Chr03: 10545974-10556607 Populus trichocarpa
Potri.003G077100 2.0kb upstream 2.0kb upstream 2000   false Chr03: 10554608-10556607 Populus trichocarpa
Potri.003G077100 2.0kb downstream 2.0kb downstream 10634   true Chr03: 10543974-10554607 Populus trichocarpa
Potri.003G077100 2.0kb downstream 2.0kb downstream 2000   false Chr03: 10543974-10545973 Populus trichocarpa
Potri.003G077100 5.0kb upstream 5.0kb upstream 13634   true Chr03: 10545974-10559607 Populus trichocarpa
Potri.003G077100 5.0kb upstream 5.0kb upstream 5000   false Chr03: 10554608-10559607 Populus trichocarpa
Potri.003G077100 5.0kb downstream 5.0kb downstream 13634   true Chr03: 10540974-10554607 Populus trichocarpa
Potri.003G077100 5.0kb downstream 5.0kb downstream 5000   false Chr03: 10540974-10545973 Populus trichocarpa
Potri.003G077100 10.0kb upstream 10.0kb upstream 18634   true Chr03: 10545974-10564607 Populus trichocarpa
Potri.003G077100 10.0kb upstream 10.0kb upstream 10000   false Chr03: 10554608-10564607 Populus trichocarpa
Potri.003G077100 10.0kb downstream 10.0kb downstream 18634   true Chr03: 10535974-10554607 Populus trichocarpa
Potri.003G077100 10.0kb downstream 10.0kb downstream 10000   false Chr03: 10535974-10545973 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.118        
cufflinks 4.036       High
cufflinks 1.633       Low
cufflinks 2.773        
cufflinks 1.971       Low
cufflinks 3.123        
cufflinks 1.769       Low
cufflinks 2.351        
cufflinks 3.312        
cufflinks 2.718        
cufflinks 3.165        
cufflinks 2.289        
cufflinks 1.728       Low
cufflinks 2.777        
cufflinks 1.867       Low
cufflinks 3.411       High
cufflinks 2.068        
cufflinks 3.544       High
cufflinks 3.063        
cufflinks 3.164        
cufflinks 2.903        
cufflinks 2.218        
cufflinks 3.026        
cufflinks 2.406        
cufflinks 22.747        
cufflinks 29.335     High  
cufflinks 25.855        
cufflinks 19.729        
cufflinks 17.851       Low
cufflinks 33.111     High High

0 Strain