Gene : Potri.009G058600 P. trichocarpa v3.0
Defline:  (1 of 4) K00559 - sterol 24-C-methyltransferase (E2.1.1.41, SMT1, ERG6) Genomic Order:  586
Name:  ? Potri.009G058600 Secondary Identifier:  ? PAC:26986581
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-2541 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G058600 0.5kb upstream 0.5kb upstream 6919 true Chr09: 6124032-6130950 Populus trichocarpa
Potri.009G058600 0.5kb upstream 0.5kb upstream 500 false Chr09: 6130451-6130950 Populus trichocarpa
Potri.009G058600 0.5kb downstream 0.5kb downstream 6919 true Chr09: 6123532-6130450 Populus trichocarpa
Potri.009G058600 0.5kb downstream 0.5kb downstream 500 false Chr09: 6123532-6124031 Populus trichocarpa
Potri.009G058600 1.0kb upstream 1.0kb upstream 7419 true Chr09: 6124032-6131450 Populus trichocarpa
Potri.009G058600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 6130451-6131450 Populus trichocarpa
Potri.009G058600 1.0kb downstream 1.0kb downstream 7419 true Chr09: 6123032-6130450 Populus trichocarpa
Potri.009G058600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 6123032-6124031 Populus trichocarpa
Potri.009G058600 2.0kb upstream 2.0kb upstream 8419 true Chr09: 6124032-6132450 Populus trichocarpa
Potri.009G058600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 6130451-6132450 Populus trichocarpa
Potri.009G058600 2.0kb downstream 2.0kb downstream 8419 true Chr09: 6122032-6130450 Populus trichocarpa
Potri.009G058600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 6122032-6124031 Populus trichocarpa
Potri.009G058600 5.0kb upstream 5.0kb upstream 11419 true Chr09: 6124032-6135450 Populus trichocarpa
Potri.009G058600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 6130451-6135450 Populus trichocarpa
Potri.009G058600 5.0kb downstream 5.0kb downstream 11419 true Chr09: 6119032-6130450 Populus trichocarpa
Potri.009G058600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 6119032-6124031 Populus trichocarpa
Potri.009G058600 10.0kb upstream 10.0kb upstream 16419 true Chr09: 6124032-6140450 Populus trichocarpa
Potri.009G058600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 6130451-6140450 Populus trichocarpa
Potri.009G058600 10.0kb downstream 10.0kb downstream 16419 true Chr09: 6114032-6130450 Populus trichocarpa
Potri.009G058600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 6114032-6124031 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.768     High  
cufflinks 18.415     High  
cufflinks 7.792       Low
cufflinks 2.72       Low
cufflinks 17.673     High  
cufflinks 17.479     High  
cufflinks 22.742     High  
cufflinks 16.91     High  
cufflinks 25.995     High High
cufflinks 19.292     High  
cufflinks 21.144     High  
cufflinks 16.65     High  
cufflinks 21.031     High  
cufflinks 10.647     High  
cufflinks 9.191     High Low
cufflinks 20.506     High  
cufflinks 19.243     High  
cufflinks 11.327     High  
cufflinks 18.14     High  
cufflinks 9.912     High  
cufflinks 18.713     High  
cufflinks 20.726     High  
cufflinks 20.916     High  
cufflinks 16.385     High  
cufflinks 13.304        
cufflinks 16.691        
cufflinks 8.477        
cufflinks 10.745        
cufflinks 20.55        
cufflinks 32.609     High High

0 Strain