Gene : Potri.003G098100 P. trichocarpa v3.0
Defline:  (1 of 2) 2.7.4.2 - Phosphomevalonate kinase Genomic Order:  981
Name:  ? Potri.003G098100 Secondary Identifier:  ? PAC:26999773
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-922 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5910 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G098100 0.5kb upstream 0.5kb upstream 7891   true Chr03: 12456759-12464649 Populus trichocarpa
Potri.003G098100 0.5kb upstream 0.5kb upstream 500   false Chr03: 12456759-12457258 Populus trichocarpa
Potri.003G098100 0.5kb downstream 0.5kb downstream 7891   true Chr03: 12457259-12465149 Populus trichocarpa
Potri.003G098100 0.5kb downstream 0.5kb downstream 500   false Chr03: 12464650-12465149 Populus trichocarpa
Potri.003G098100 1.0kb upstream 1.0kb upstream 8391   true Chr03: 12456259-12464649 Populus trichocarpa
Potri.003G098100 1.0kb upstream 1.0kb upstream 1000   false Chr03: 12456259-12457258 Populus trichocarpa
Potri.003G098100 1.0kb downstream 1.0kb downstream 8391   true Chr03: 12457259-12465649 Populus trichocarpa
Potri.003G098100 1.0kb downstream 1.0kb downstream 1000   false Chr03: 12464650-12465649 Populus trichocarpa
Potri.003G098100 2.0kb upstream 2.0kb upstream 9391   true Chr03: 12455259-12464649 Populus trichocarpa
Potri.003G098100 2.0kb upstream 2.0kb upstream 2000   false Chr03: 12455259-12457258 Populus trichocarpa
Potri.003G098100 2.0kb downstream 2.0kb downstream 9391   true Chr03: 12457259-12466649 Populus trichocarpa
Potri.003G098100 2.0kb downstream 2.0kb downstream 2000   false Chr03: 12464650-12466649 Populus trichocarpa
Potri.003G098100 5.0kb upstream 5.0kb upstream 12391   true Chr03: 12452259-12464649 Populus trichocarpa
Potri.003G098100 5.0kb upstream 5.0kb upstream 5000   false Chr03: 12452259-12457258 Populus trichocarpa
Potri.003G098100 5.0kb downstream 5.0kb downstream 12391   true Chr03: 12457259-12469649 Populus trichocarpa
Potri.003G098100 5.0kb downstream 5.0kb downstream 5000   false Chr03: 12464650-12469649 Populus trichocarpa
Potri.003G098100 10.0kb upstream 10.0kb upstream 17391   true Chr03: 12447259-12464649 Populus trichocarpa
Potri.003G098100 10.0kb upstream 10.0kb upstream 10000   false Chr03: 12447259-12457258 Populus trichocarpa
Potri.003G098100 10.0kb downstream 10.0kb downstream 17391   true Chr03: 12457259-12474649 Populus trichocarpa
Potri.003G098100 10.0kb downstream 10.0kb downstream 10000   false Chr03: 12464650-12474649 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.546        
cufflinks 1.57        
cufflinks 1.303        
cufflinks 1.349        
cufflinks 0.738       Low
cufflinks 0.586       Low
cufflinks 1.417        
cufflinks 0.824       Low
cufflinks 1.293        
cufflinks 1.116        
cufflinks 1.136        
cufflinks 2.319       High
cufflinks 1.157        
cufflinks 1.816       High
cufflinks 0.901        
cufflinks 1.624        
cufflinks 1.643        
cufflinks 0.546       Low
cufflinks 1.187        
cufflinks 1.205        
cufflinks 1.304        
cufflinks 2.17       High
cufflinks 1.391        
cufflinks 1.88       High
cufflinks 5.239        
cufflinks 3.784       Low
cufflinks 5.516        
cufflinks 6.212        
cufflinks 8.323       High
cufflinks 4.094        

0 Strain