Gene : Potri.004G100000 P. trichocarpa v3.0
Defline:  (1 of 3) K01602 - ribulose-bisphosphate carboxylase small chain (rbcS) Genomic Order:  1000
Name:  ? Potri.004G100000 Secondary Identifier:  ? PAC:26989253
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5723 Populus trichocarpa pathologic  
Ptrichocarpa PHOTOALL-PWY Populus trichocarpa pathologic  
Ptrichocarpa CALVIN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G100000 0.5kb upstream 0.5kb upstream 2358 true Chr04: 8655656-8658013 Populus trichocarpa
Potri.004G100000 0.5kb upstream 0.5kb upstream 500 false Chr04: 8657514-8658013 Populus trichocarpa
Potri.004G100000 0.5kb downstream 0.5kb downstream 2358 true Chr04: 8655156-8657513 Populus trichocarpa
Potri.004G100000 0.5kb downstream 0.5kb downstream 500 false Chr04: 8655156-8655655 Populus trichocarpa
Potri.004G100000 1.0kb upstream 1.0kb upstream 2858 true Chr04: 8655656-8658513 Populus trichocarpa
Potri.004G100000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 8657514-8658513 Populus trichocarpa
Potri.004G100000 1.0kb downstream 1.0kb downstream 2858 true Chr04: 8654656-8657513 Populus trichocarpa
Potri.004G100000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 8654656-8655655 Populus trichocarpa
Potri.004G100000 2.0kb upstream 2.0kb upstream 3858 true Chr04: 8655656-8659513 Populus trichocarpa
Potri.004G100000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 8657514-8659513 Populus trichocarpa
Potri.004G100000 2.0kb downstream 2.0kb downstream 3858 true Chr04: 8653656-8657513 Populus trichocarpa
Potri.004G100000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 8653656-8655655 Populus trichocarpa
Potri.004G100000 5.0kb upstream 5.0kb upstream 6858 true Chr04: 8655656-8662513 Populus trichocarpa
Potri.004G100000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 8657514-8662513 Populus trichocarpa
Potri.004G100000 5.0kb downstream 5.0kb downstream 6858 true Chr04: 8650656-8657513 Populus trichocarpa
Potri.004G100000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 8650656-8655655 Populus trichocarpa
Potri.004G100000 10.0kb upstream 10.0kb upstream 11858 true Chr04: 8655656-8667513 Populus trichocarpa
Potri.004G100000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 8657514-8667513 Populus trichocarpa
Potri.004G100000 10.0kb downstream 10.0kb downstream 11858 true Chr04: 8645656-8657513 Populus trichocarpa
Potri.004G100000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 8645656-8655655 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.89       Low
cufflinks 1401.6     High High
cufflinks 28.415     High  
cufflinks 1401.72     High High
cufflinks 262.81     High  
cufflinks 567.01     High  
cufflinks 47.475     High  
cufflinks 411.764     High  
cufflinks 265.67     High  
cufflinks 30.927     High  
cufflinks 1122.61     High High
cufflinks 1857.51     High High
cufflinks 0.813       Low
cufflinks 1048.03     High High
cufflinks 27.403     High  
cufflinks 0.776       Low
cufflinks 312.824     High  
cufflinks 31.222     High  
cufflinks 36.89     High  
cufflinks 0.982       Low
cufflinks 52.742     High  
cufflinks 38.107     High  
cufflinks 44.903     High  
cufflinks 315.403     High  
cufflinks 64.838     High  
cufflinks 72.945     High  
cufflinks 83.123     High  
cufflinks 80.21     High  
cufflinks 95.398     High  
cufflinks 48.004     High  

0 Strain