Gene : Potri.003G176600 P. trichocarpa v3.0
Defline:  (1 of 2) K01687 - dihydroxy-acid dehydratase (ilvD) Genomic Order:  1766
Name:  ? Potri.003G176600 Secondary Identifier:  ? PAC:26999089
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa BRANCHED-CHAIN-AA-SYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa VALSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa ILEUSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-3001 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G176600 0.5kb upstream 0.5kb upstream 6313   true Chr03: 18494524-18500836 Populus trichocarpa
Potri.003G176600 0.5kb upstream 0.5kb upstream 500   false Chr03: 18494524-18495023 Populus trichocarpa
Potri.003G176600 0.5kb downstream 0.5kb downstream 6313   true Chr03: 18495024-18501336 Populus trichocarpa
Potri.003G176600 0.5kb downstream 0.5kb downstream 500   false Chr03: 18500837-18501336 Populus trichocarpa
Potri.003G176600 1.0kb upstream 1.0kb upstream 6813   true Chr03: 18494024-18500836 Populus trichocarpa
Potri.003G176600 1.0kb upstream 1.0kb upstream 1000   false Chr03: 18494024-18495023 Populus trichocarpa
Potri.003G176600 1.0kb downstream 1.0kb downstream 6813   true Chr03: 18495024-18501836 Populus trichocarpa
Potri.003G176600 1.0kb downstream 1.0kb downstream 1000   false Chr03: 18500837-18501836 Populus trichocarpa
Potri.003G176600 2.0kb upstream 2.0kb upstream 7813   true Chr03: 18493024-18500836 Populus trichocarpa
Potri.003G176600 2.0kb upstream 2.0kb upstream 2000   false Chr03: 18493024-18495023 Populus trichocarpa
Potri.003G176600 2.0kb downstream 2.0kb downstream 7813   true Chr03: 18495024-18502836 Populus trichocarpa
Potri.003G176600 2.0kb downstream 2.0kb downstream 2000   false Chr03: 18500837-18502836 Populus trichocarpa
Potri.003G176600 5.0kb upstream 5.0kb upstream 10813   true Chr03: 18490024-18500836 Populus trichocarpa
Potri.003G176600 5.0kb upstream 5.0kb upstream 5000   false Chr03: 18490024-18495023 Populus trichocarpa
Potri.003G176600 5.0kb downstream 5.0kb downstream 10813   true Chr03: 18495024-18505836 Populus trichocarpa
Potri.003G176600 5.0kb downstream 5.0kb downstream 5000   false Chr03: 18500837-18505836 Populus trichocarpa
Potri.003G176600 10.0kb upstream 10.0kb upstream 15813   true Chr03: 18485024-18500836 Populus trichocarpa
Potri.003G176600 10.0kb upstream 10.0kb upstream 10000   false Chr03: 18485024-18495023 Populus trichocarpa
Potri.003G176600 10.0kb downstream 10.0kb downstream 15813   true Chr03: 18495024-18510836 Populus trichocarpa
Potri.003G176600 10.0kb downstream 10.0kb downstream 10000   false Chr03: 18500837-18510836 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.299        
cufflinks 1.373       Low
cufflinks 2.641        
cufflinks 1.916        
cufflinks 1.981        
cufflinks 3.026        
cufflinks 2.262        
cufflinks 4.054       High
cufflinks 2.567        
cufflinks 3.93       High
cufflinks 2.631        
cufflinks 2.313        
cufflinks 1.496       Low
cufflinks 4.798       High
cufflinks 3.051        
cufflinks 2.596        
cufflinks 1.325       Low
cufflinks 2.073        
cufflinks 1.675       Low
cufflinks 4.353       High
cufflinks 2.04        
cufflinks 2.897        
cufflinks 2.999        
cufflinks 2.771        
cufflinks 16.711        
cufflinks 21.682        
cufflinks 25.67        
cufflinks 35.281     High High
cufflinks 36.18     High High
cufflinks 17.724        

0 Strain