Gene : Potri.004G088800 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR23315:SF65 - ARM REPEAT SUPERFAMILY PROTEIN Genomic Order:  888
Name:  ? Potri.004G088800 Secondary Identifier:  ? PAC:26992779
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7511 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G088800 0.5kb upstream 0.5kb upstream 5416 true Chr04: 7493225-7498640 Populus trichocarpa
Potri.004G088800 0.5kb upstream 0.5kb upstream 500 false Chr04: 7498141-7498640 Populus trichocarpa
Potri.004G088800 0.5kb downstream 0.5kb downstream 5416 true Chr04: 7492725-7498140 Populus trichocarpa
Potri.004G088800 0.5kb downstream 0.5kb downstream 500 false Chr04: 7492725-7493224 Populus trichocarpa
Potri.004G088800 1.0kb upstream 1.0kb upstream 5916 true Chr04: 7493225-7499140 Populus trichocarpa
Potri.004G088800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 7498141-7499140 Populus trichocarpa
Potri.004G088800 1.0kb downstream 1.0kb downstream 5916 true Chr04: 7492225-7498140 Populus trichocarpa
Potri.004G088800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 7492225-7493224 Populus trichocarpa
Potri.004G088800 2.0kb upstream 2.0kb upstream 6916 true Chr04: 7493225-7500140 Populus trichocarpa
Potri.004G088800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 7498141-7500140 Populus trichocarpa
Potri.004G088800 2.0kb downstream 2.0kb downstream 6916 true Chr04: 7491225-7498140 Populus trichocarpa
Potri.004G088800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 7491225-7493224 Populus trichocarpa
Potri.004G088800 5.0kb upstream 5.0kb upstream 9916 true Chr04: 7493225-7503140 Populus trichocarpa
Potri.004G088800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 7498141-7503140 Populus trichocarpa
Potri.004G088800 5.0kb downstream 5.0kb downstream 9916 true Chr04: 7488225-7498140 Populus trichocarpa
Potri.004G088800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 7488225-7493224 Populus trichocarpa
Potri.004G088800 10.0kb upstream 10.0kb upstream 14916 true Chr04: 7493225-7508140 Populus trichocarpa
Potri.004G088800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 7498141-7508140 Populus trichocarpa
Potri.004G088800 10.0kb downstream 10.0kb downstream 14916 true Chr04: 7483225-7498140 Populus trichocarpa
Potri.004G088800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 7483225-7493224 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.345        
cufflinks 0.942        
cufflinks 1.379        
cufflinks 0.61       Low
cufflinks 0.644       Low
cufflinks 0.771        
cufflinks 1.548       High
cufflinks 0.716       Low
cufflinks 1.149        
cufflinks 1.388        
cufflinks 2.046       High
cufflinks 0.684       Low
cufflinks 1.612       High
cufflinks 1.044        
cufflinks 1.438        
cufflinks 1.684       High
cufflinks 0.722       Low
cufflinks 1.17        
cufflinks 1.47        
cufflinks 0.749        
cufflinks 1.411        
cufflinks 0.895        
cufflinks 0.918        
cufflinks 0.657       Low
cufflinks 11.62        
cufflinks 14.536        
cufflinks 11.648        
cufflinks 10.437        
cufflinks 7.56        
cufflinks 18.908       High

0 Strain