Gene : Potri.004G053400 P. trichocarpa v3.0
Defline:  (1 of 2) K03405 - magnesium chelatase subunit I (chlI, bchI) Genomic Order:  534
Name:  ? Potri.004G053400 Secondary Identifier:  ? PAC:26992265
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa CHLOROPHYLL-SYN Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G053400 0.5kb upstream 0.5kb upstream 2717 true Chr04: 4174810-4177526 Populus trichocarpa
Potri.004G053400 0.5kb upstream 0.5kb upstream 500 false Chr04: 4177027-4177526 Populus trichocarpa
Potri.004G053400 0.5kb downstream 0.5kb downstream 2717 true Chr04: 4174310-4177026 Populus trichocarpa
Potri.004G053400 0.5kb downstream 0.5kb downstream 500 false Chr04: 4174310-4174809 Populus trichocarpa
Potri.004G053400 1.0kb upstream 1.0kb upstream 3217 true Chr04: 4174810-4178026 Populus trichocarpa
Potri.004G053400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4177027-4178026 Populus trichocarpa
Potri.004G053400 1.0kb downstream 1.0kb downstream 3217 true Chr04: 4173810-4177026 Populus trichocarpa
Potri.004G053400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4173810-4174809 Populus trichocarpa
Potri.004G053400 2.0kb upstream 2.0kb upstream 4217 true Chr04: 4174810-4179026 Populus trichocarpa
Potri.004G053400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4177027-4179026 Populus trichocarpa
Potri.004G053400 2.0kb downstream 2.0kb downstream 4217 true Chr04: 4172810-4177026 Populus trichocarpa
Potri.004G053400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4172810-4174809 Populus trichocarpa
Potri.004G053400 5.0kb upstream 5.0kb upstream 7217 true Chr04: 4174810-4182026 Populus trichocarpa
Potri.004G053400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4177027-4182026 Populus trichocarpa
Potri.004G053400 5.0kb downstream 5.0kb downstream 7217 true Chr04: 4169810-4177026 Populus trichocarpa
Potri.004G053400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4169810-4174809 Populus trichocarpa
Potri.004G053400 10.0kb upstream 10.0kb upstream 12217 true Chr04: 4174810-4187026 Populus trichocarpa
Potri.004G053400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4177027-4187026 Populus trichocarpa
Potri.004G053400 10.0kb downstream 10.0kb downstream 12217 true Chr04: 4164810-4177026 Populus trichocarpa
Potri.004G053400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4164810-4174809 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 64.643     High  
cufflinks 55.327     High  
cufflinks 67.024     High  
cufflinks 3.619       Low
cufflinks 15.004     High  
cufflinks 43.894     High  
cufflinks 21.948     High  
cufflinks 23.527     High  
cufflinks 14.115     High  
cufflinks 53.219     High  
cufflinks 16.447     High  
cufflinks 2.477       Low
cufflinks 119.03     High High
cufflinks 4.306       Low
cufflinks 21.09     High  
cufflinks 12.888     High  
cufflinks 13.052     High  
cufflinks 4.329       Low
cufflinks 66.074     High  
cufflinks 14.793     High  
cufflinks 61.105     High  
cufflinks 63.725     High  
cufflinks 49.78     High  
cufflinks 38.577     High  
cufflinks 46.976     High  
cufflinks 58.401     High  
cufflinks 56.292     High  
cufflinks 43.752     High  
cufflinks 39.541     High Low
cufflinks 55.436     High  

0 Strain