Gene : Potri.004G229200 P. trichocarpa v3.0
Defline:  (1 of 1) K12839 - survival of motor neuron-related-splicing factor 30 (SMNDC1, SPF30) Genomic Order:  2292
Name:  ? Potri.004G229200 Secondary Identifier:  ? PAC:26992166
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G229200 0.5kb upstream 0.5kb upstream 4746 true Chr04: 23435384-23440129 Populus trichocarpa
Potri.004G229200 0.5kb upstream 0.5kb upstream 500 false Chr04: 23439630-23440129 Populus trichocarpa
Potri.004G229200 0.5kb downstream 0.5kb downstream 4746 true Chr04: 23434884-23439629 Populus trichocarpa
Potri.004G229200 0.5kb downstream 0.5kb downstream 500 false Chr04: 23434884-23435383 Populus trichocarpa
Potri.004G229200 1.0kb upstream 1.0kb upstream 5246 true Chr04: 23435384-23440629 Populus trichocarpa
Potri.004G229200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 23439630-23440629 Populus trichocarpa
Potri.004G229200 1.0kb downstream 1.0kb downstream 5246 true Chr04: 23434384-23439629 Populus trichocarpa
Potri.004G229200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 23434384-23435383 Populus trichocarpa
Potri.004G229200 2.0kb upstream 2.0kb upstream 6246 true Chr04: 23435384-23441629 Populus trichocarpa
Potri.004G229200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 23439630-23441629 Populus trichocarpa
Potri.004G229200 2.0kb downstream 2.0kb downstream 6246 true Chr04: 23433384-23439629 Populus trichocarpa
Potri.004G229200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 23433384-23435383 Populus trichocarpa
Potri.004G229200 5.0kb upstream 5.0kb upstream 9246 true Chr04: 23435384-23444629 Populus trichocarpa
Potri.004G229200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 23439630-23444629 Populus trichocarpa
Potri.004G229200 5.0kb downstream 5.0kb downstream 9246 true Chr04: 23430384-23439629 Populus trichocarpa
Potri.004G229200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 23430384-23435383 Populus trichocarpa
Potri.004G229200 10.0kb upstream 10.0kb upstream 14246 true Chr04: 23435384-23449629 Populus trichocarpa
Potri.004G229200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 23439630-23449629 Populus trichocarpa
Potri.004G229200 10.0kb downstream 10.0kb downstream 14246 true Chr04: 23425384-23439629 Populus trichocarpa
Potri.004G229200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 23425384-23435383 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.206        
cufflinks 2.116        
cufflinks 2.448        
cufflinks 2.127        
cufflinks 3.134       High
cufflinks 2.396        
cufflinks 1.558       Low
cufflinks 1.561       Low
cufflinks 2.018        
cufflinks 1.534       Low
cufflinks 1.574       Low
cufflinks 1.966        
cufflinks 1.875        
cufflinks 2.38        
cufflinks 4.878       High
cufflinks 3.432       High
cufflinks 1.951        
cufflinks 1.694        
cufflinks 2.456        
cufflinks 2.108        
cufflinks 3.591       High
cufflinks 1.562       Low
cufflinks 2.734        
cufflinks 2.357        
cufflinks 58.914     High  
cufflinks 45.287     High  
cufflinks 51.419     High  
cufflinks 79.497     High High
cufflinks 61.184     High  
cufflinks 42.762     High  

0 Strain