Gene : Potri.014G173400 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR31742//PTHR31742:SF1 - FAMILY NOT NAMED // RPA-INTERACTING PROTEIN Genomic Order:  1734
Name:  ? Potri.014G173400 Secondary Identifier:  ? PAC:27035073
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.014G173400 0.5kb upstream 0.5kb upstream 4399 true Chr14: 14043750-14048148 Populus trichocarpa
Potri.014G173400 0.5kb upstream 0.5kb upstream 500 false Chr14: 14043750-14044249 Populus trichocarpa
Potri.014G173400 0.5kb downstream 0.5kb downstream 4399 true Chr14: 14044250-14048648 Populus trichocarpa
Potri.014G173400 0.5kb downstream 0.5kb downstream 500 false Chr14: 14048149-14048648 Populus trichocarpa
Potri.014G173400 1.0kb upstream 1.0kb upstream 4899 true Chr14: 14043250-14048148 Populus trichocarpa
Potri.014G173400 1.0kb upstream 1.0kb upstream 1000 false Chr14: 14043250-14044249 Populus trichocarpa
Potri.014G173400 1.0kb downstream 1.0kb downstream 4899 true Chr14: 14044250-14049148 Populus trichocarpa
Potri.014G173400 1.0kb downstream 1.0kb downstream 1000 false Chr14: 14048149-14049148 Populus trichocarpa
Potri.014G173400 2.0kb upstream 2.0kb upstream 5899 true Chr14: 14042250-14048148 Populus trichocarpa
Potri.014G173400 2.0kb upstream 2.0kb upstream 2000 false Chr14: 14042250-14044249 Populus trichocarpa
Potri.014G173400 2.0kb downstream 2.0kb downstream 5899 true Chr14: 14044250-14050148 Populus trichocarpa
Potri.014G173400 2.0kb downstream 2.0kb downstream 2000 false Chr14: 14048149-14050148 Populus trichocarpa
Potri.014G173400 5.0kb upstream 5.0kb upstream 8899 true Chr14: 14039250-14048148 Populus trichocarpa
Potri.014G173400 5.0kb upstream 5.0kb upstream 5000 false Chr14: 14039250-14044249 Populus trichocarpa
Potri.014G173400 5.0kb downstream 5.0kb downstream 8899 true Chr14: 14044250-14053148 Populus trichocarpa
Potri.014G173400 5.0kb downstream 5.0kb downstream 5000 false Chr14: 14048149-14053148 Populus trichocarpa
Potri.014G173400 10.0kb upstream 10.0kb upstream 13899 true Chr14: 14034250-14048148 Populus trichocarpa
Potri.014G173400 10.0kb upstream 10.0kb upstream 10000 false Chr14: 14034250-14044249 Populus trichocarpa
Potri.014G173400 10.0kb downstream 10.0kb downstream 13899 true Chr14: 14044250-14058148 Populus trichocarpa
Potri.014G173400 10.0kb downstream 10.0kb downstream 10000 false Chr14: 14048149-14058148 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.406        
cufflinks 0.419        
cufflinks 0.304        
cufflinks 0.39        
cufflinks 0.464        
cufflinks 0.385        
cufflinks 0.235        
cufflinks 0.376        
cufflinks 0.169       Low
cufflinks 0.235        
cufflinks 0.324        
cufflinks 0.428        
cufflinks 0.494        
cufflinks 0.38        
cufflinks 1.091       High
cufflinks 0.403        
cufflinks 0.417        
cufflinks 0.441        
cufflinks 0.373        
cufflinks 0.332        
cufflinks 0.164       Low
cufflinks 0.639       High
cufflinks 0.122     Low Low
cufflinks 0.489        
cufflinks 3.932       High
cufflinks 3.035        
cufflinks 2.215        
cufflinks 3.736       High
cufflinks 3.063        
cufflinks 2.932        

0 Strain