Gene : Potri.004G189300 P. trichocarpa v3.0
Defline:  (1 of 1) PTHR28052:SF1 - UPF0545 PROTEIN C22ORF39 Genomic Order:  1893
Name:  ? Potri.004G189300 Secondary Identifier:  ? PAC:26990192
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G189300 0.5kb upstream 0.5kb upstream 3287 true Chr04: 20422002-20425288 Populus trichocarpa
Potri.004G189300 0.5kb upstream 0.5kb upstream 500 false Chr04: 20424789-20425288 Populus trichocarpa
Potri.004G189300 0.5kb downstream 0.5kb downstream 3287 true Chr04: 20421502-20424788 Populus trichocarpa
Potri.004G189300 0.5kb downstream 0.5kb downstream 500 false Chr04: 20421502-20422001 Populus trichocarpa
Potri.004G189300 1.0kb upstream 1.0kb upstream 3787 true Chr04: 20422002-20425788 Populus trichocarpa
Potri.004G189300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 20424789-20425788 Populus trichocarpa
Potri.004G189300 1.0kb downstream 1.0kb downstream 3787 true Chr04: 20421002-20424788 Populus trichocarpa
Potri.004G189300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 20421002-20422001 Populus trichocarpa
Potri.004G189300 2.0kb upstream 2.0kb upstream 4787 true Chr04: 20422002-20426788 Populus trichocarpa
Potri.004G189300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 20424789-20426788 Populus trichocarpa
Potri.004G189300 2.0kb downstream 2.0kb downstream 4787 true Chr04: 20420002-20424788 Populus trichocarpa
Potri.004G189300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 20420002-20422001 Populus trichocarpa
Potri.004G189300 5.0kb upstream 5.0kb upstream 7787 true Chr04: 20422002-20429788 Populus trichocarpa
Potri.004G189300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 20424789-20429788 Populus trichocarpa
Potri.004G189300 5.0kb downstream 5.0kb downstream 7787 true Chr04: 20417002-20424788 Populus trichocarpa
Potri.004G189300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 20417002-20422001 Populus trichocarpa
Potri.004G189300 10.0kb upstream 10.0kb upstream 12787 true Chr04: 20422002-20434788 Populus trichocarpa
Potri.004G189300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 20424789-20434788 Populus trichocarpa
Potri.004G189300 10.0kb downstream 10.0kb downstream 12787 true Chr04: 20412002-20424788 Populus trichocarpa
Potri.004G189300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 20412002-20422001 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.488        
cufflinks 1.59        
cufflinks 2.31       High
cufflinks 2.302       High
cufflinks 2.542       High
cufflinks 2.078        
cufflinks 1.806        
cufflinks 1.215        
cufflinks 1.277        
cufflinks 1.818        
cufflinks 2.008        
cufflinks 1.923        
cufflinks 1.065       Low
cufflinks 1.303        
cufflinks 1.085       Low
cufflinks 2.106        
cufflinks 1.072       Low
cufflinks 1.336        
cufflinks 2.118        
cufflinks 0.819       Low
cufflinks 1.765        
cufflinks 2.322       High
cufflinks 1.338        
cufflinks 1.326        
cufflinks 4.809        
cufflinks 3.186        
cufflinks 3.67        
cufflinks 6.291       High
cufflinks 7.018       High
cufflinks 3.367        

0 Strain