Gene : Potri.004G230200 P. trichocarpa v3.0
Defline:  (1 of 1) 2.7.7.60 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / MEP cytidylyltransferase Genomic Order:  2302
Name:  ? Potri.004G230200 Secondary Identifier:  ? PAC:26989384
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7560 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G230200 0.5kb upstream 0.5kb upstream 6558 true Chr04: 23547312-23553869 Populus trichocarpa
Potri.004G230200 0.5kb upstream 0.5kb upstream 500 false Chr04: 23547312-23547811 Populus trichocarpa
Potri.004G230200 0.5kb downstream 0.5kb downstream 6558 true Chr04: 23547812-23554369 Populus trichocarpa
Potri.004G230200 0.5kb downstream 0.5kb downstream 500 false Chr04: 23553870-23554369 Populus trichocarpa
Potri.004G230200 1.0kb upstream 1.0kb upstream 7058 true Chr04: 23546812-23553869 Populus trichocarpa
Potri.004G230200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 23546812-23547811 Populus trichocarpa
Potri.004G230200 1.0kb downstream 1.0kb downstream 7058 true Chr04: 23547812-23554869 Populus trichocarpa
Potri.004G230200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 23553870-23554869 Populus trichocarpa
Potri.004G230200 2.0kb upstream 2.0kb upstream 8058 true Chr04: 23545812-23553869 Populus trichocarpa
Potri.004G230200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 23545812-23547811 Populus trichocarpa
Potri.004G230200 2.0kb downstream 2.0kb downstream 8058 true Chr04: 23547812-23555869 Populus trichocarpa
Potri.004G230200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 23553870-23555869 Populus trichocarpa
Potri.004G230200 5.0kb upstream 5.0kb upstream 11058 true Chr04: 23542812-23553869 Populus trichocarpa
Potri.004G230200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 23542812-23547811 Populus trichocarpa
Potri.004G230200 5.0kb downstream 5.0kb downstream 11058 true Chr04: 23547812-23558869 Populus trichocarpa
Potri.004G230200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 23553870-23558869 Populus trichocarpa
Potri.004G230200 10.0kb upstream 10.0kb upstream 16058 true Chr04: 23537812-23553869 Populus trichocarpa
Potri.004G230200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 23537812-23547811 Populus trichocarpa
Potri.004G230200 10.0kb downstream 10.0kb downstream 16058 true Chr04: 23547812-23563869 Populus trichocarpa
Potri.004G230200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 23553870-23563869 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.318        
cufflinks 7.413       High
cufflinks 1.299       Low
cufflinks 1.603       Low
cufflinks 2.337        
cufflinks 3.934        
cufflinks 3.343        
cufflinks 5.018       High
cufflinks 2.22        
cufflinks 3.939        
cufflinks 2.33        
cufflinks 4.336        
cufflinks 3.842        
cufflinks 3.604        
cufflinks 1.723       Low
cufflinks 2.298        
cufflinks 1.513       Low
cufflinks 1.718       Low
cufflinks 1.993        
cufflinks 4.87       High
cufflinks 2.986        
cufflinks 2.267        
cufflinks 3.829        
cufflinks 4.462       High
cufflinks 6.275        
cufflinks 6.805        
cufflinks 6.729        
cufflinks 8.761       High
cufflinks 8.224        
cufflinks 6.153        

0 Strain