Gene : Potri.004G043700 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR21371//PTHR21371:SF1//PTHR21371:SF11 - FAMILY NOT NAMED // KETOL-ACID REDUCTOISOMERASE, MITOCHONDRIAL // SUBFAMILY NOT NAMED Genomic Order:  437
Name:  ? Potri.004G043700 Secondary Identifier:  ? PAC:26989211
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa BRANCHED-CHAIN-AA-SYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa VALSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa ILEUSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-3001 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G043700 0.5kb upstream 0.5kb upstream 6292 true Chr04: 3307278-3313569 Populus trichocarpa
Potri.004G043700 0.5kb upstream 0.5kb upstream 500 false Chr04: 3307278-3307777 Populus trichocarpa
Potri.004G043700 0.5kb downstream 0.5kb downstream 6292 true Chr04: 3307778-3314069 Populus trichocarpa
Potri.004G043700 0.5kb downstream 0.5kb downstream 500 false Chr04: 3313570-3314069 Populus trichocarpa
Potri.004G043700 1.0kb upstream 1.0kb upstream 6792 true Chr04: 3306778-3313569 Populus trichocarpa
Potri.004G043700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3306778-3307777 Populus trichocarpa
Potri.004G043700 1.0kb downstream 1.0kb downstream 6792 true Chr04: 3307778-3314569 Populus trichocarpa
Potri.004G043700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3313570-3314569 Populus trichocarpa
Potri.004G043700 2.0kb upstream 2.0kb upstream 7792 true Chr04: 3305778-3313569 Populus trichocarpa
Potri.004G043700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3305778-3307777 Populus trichocarpa
Potri.004G043700 2.0kb downstream 2.0kb downstream 7792 true Chr04: 3307778-3315569 Populus trichocarpa
Potri.004G043700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3313570-3315569 Populus trichocarpa
Potri.004G043700 5.0kb upstream 5.0kb upstream 10792 true Chr04: 3302778-3313569 Populus trichocarpa
Potri.004G043700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3302778-3307777 Populus trichocarpa
Potri.004G043700 5.0kb downstream 5.0kb downstream 10792 true Chr04: 3307778-3318569 Populus trichocarpa
Potri.004G043700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3313570-3318569 Populus trichocarpa
Potri.004G043700 10.0kb upstream 10.0kb upstream 15792 true Chr04: 3297778-3313569 Populus trichocarpa
Potri.004G043700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3297778-3307777 Populus trichocarpa
Potri.004G043700 10.0kb downstream 10.0kb downstream 15792 true Chr04: 3307778-3323569 Populus trichocarpa
Potri.004G043700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3313570-3323569 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.965        
cufflinks 10.858     High  
cufflinks 6.932        
cufflinks 9.69     High  
cufflinks 8.406        
cufflinks 10.07     High  
cufflinks 11.269     High  
cufflinks 9.741        
cufflinks 8.097        
cufflinks 9.866     High  
cufflinks 11.28     High  
cufflinks 9.332     High  
cufflinks 6.354        
cufflinks 8.003        
cufflinks 3.599       Low
cufflinks 8.15        
cufflinks 9.894     High  
cufflinks 9.542     High  
cufflinks 11.052     High  
cufflinks 1.754       Low
cufflinks 6.85        
cufflinks 11.505     High  
cufflinks 4.551       Low
cufflinks 10.691     High  
cufflinks 24.987        
cufflinks 31.229     High  
cufflinks 32.684     High  
cufflinks 40.329     High High
cufflinks 35.557     High  
cufflinks 30.081     High  

0 Strain