Gene : Potri.004G106200 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR31209:SF0 - COFACTOR-INDEPENDENT PHOSPHOGLYCERATE MUTASE Genomic Order:  1062
Name:  ? Potri.004G106200 Secondary Identifier:  ? PAC:26990927
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1042 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5464 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5723 Populus trichocarpa pathologic  
Ptrichocarpa GLUCONEO-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G106200 0.5kb upstream 0.5kb upstream 5913 true Chr04: 9331449-9337361 Populus trichocarpa
Potri.004G106200 0.5kb upstream 0.5kb upstream 500 false Chr04: 9336862-9337361 Populus trichocarpa
Potri.004G106200 0.5kb downstream 0.5kb downstream 5913 true Chr04: 9330949-9336861 Populus trichocarpa
Potri.004G106200 0.5kb downstream 0.5kb downstream 500 false Chr04: 9330949-9331448 Populus trichocarpa
Potri.004G106200 1.0kb upstream 1.0kb upstream 6413 true Chr04: 9331449-9337861 Populus trichocarpa
Potri.004G106200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 9336862-9337861 Populus trichocarpa
Potri.004G106200 1.0kb downstream 1.0kb downstream 6413 true Chr04: 9330449-9336861 Populus trichocarpa
Potri.004G106200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 9330449-9331448 Populus trichocarpa
Potri.004G106200 2.0kb upstream 2.0kb upstream 7413 true Chr04: 9331449-9338861 Populus trichocarpa
Potri.004G106200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 9336862-9338861 Populus trichocarpa
Potri.004G106200 2.0kb downstream 2.0kb downstream 7413 true Chr04: 9329449-9336861 Populus trichocarpa
Potri.004G106200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 9329449-9331448 Populus trichocarpa
Potri.004G106200 5.0kb upstream 5.0kb upstream 10413 true Chr04: 9331449-9341861 Populus trichocarpa
Potri.004G106200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 9336862-9341861 Populus trichocarpa
Potri.004G106200 5.0kb downstream 5.0kb downstream 10413 true Chr04: 9326449-9336861 Populus trichocarpa
Potri.004G106200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 9326449-9331448 Populus trichocarpa
Potri.004G106200 10.0kb upstream 10.0kb upstream 15413 true Chr04: 9331449-9346861 Populus trichocarpa
Potri.004G106200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 9336862-9346861 Populus trichocarpa
Potri.004G106200 10.0kb downstream 10.0kb downstream 15413 true Chr04: 9321449-9336861 Populus trichocarpa
Potri.004G106200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 9321449-9331448 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.094       Low
cufflinks 3.107        
cufflinks 2.011       Low
cufflinks 2.558        
cufflinks 2.495        
cufflinks 2.355        
cufflinks 2.058       Low
cufflinks 2.991        
cufflinks 3.243       High
cufflinks 2.264        
cufflinks 2.557        
cufflinks 3.595       High
cufflinks 2.891        
cufflinks 2.632        
cufflinks 2.55        
cufflinks 3.044        
cufflinks 3.208       High
cufflinks 2.043       Low
cufflinks 2.074       Low
cufflinks 3.161        
cufflinks 3.132        
cufflinks 2.595        
cufflinks 3.276       High
cufflinks 3.057        
cufflinks 15.133        
cufflinks 13.062        
cufflinks 13.948        
cufflinks 11.009       Low
cufflinks 10.888       Low
cufflinks 14.571        

0 Strain