Gene : Potri.004G201300 P. trichocarpa v3.0
Defline:  (1 of 2) K13206 - coiled-coil domain-containing protein 55 (CCDC55) Genomic Order:  2013
Name:  ? Potri.004G201300 Secondary Identifier:  ? PAC:26989859
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G201300 0.5kb upstream 0.5kb upstream 3624 true Chr04: 21248194-21251817 Populus trichocarpa
Potri.004G201300 0.5kb upstream 0.5kb upstream 500 false Chr04: 21251318-21251817 Populus trichocarpa
Potri.004G201300 0.5kb downstream 0.5kb downstream 3624 true Chr04: 21247694-21251317 Populus trichocarpa
Potri.004G201300 0.5kb downstream 0.5kb downstream 500 false Chr04: 21247694-21248193 Populus trichocarpa
Potri.004G201300 1.0kb upstream 1.0kb upstream 4124 true Chr04: 21248194-21252317 Populus trichocarpa
Potri.004G201300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 21251318-21252317 Populus trichocarpa
Potri.004G201300 1.0kb downstream 1.0kb downstream 4124 true Chr04: 21247194-21251317 Populus trichocarpa
Potri.004G201300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 21247194-21248193 Populus trichocarpa
Potri.004G201300 2.0kb upstream 2.0kb upstream 5124 true Chr04: 21248194-21253317 Populus trichocarpa
Potri.004G201300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 21251318-21253317 Populus trichocarpa
Potri.004G201300 2.0kb downstream 2.0kb downstream 5124 true Chr04: 21246194-21251317 Populus trichocarpa
Potri.004G201300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 21246194-21248193 Populus trichocarpa
Potri.004G201300 5.0kb upstream 5.0kb upstream 8124 true Chr04: 21248194-21256317 Populus trichocarpa
Potri.004G201300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 21251318-21256317 Populus trichocarpa
Potri.004G201300 5.0kb downstream 5.0kb downstream 8124 true Chr04: 21243194-21251317 Populus trichocarpa
Potri.004G201300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 21243194-21248193 Populus trichocarpa
Potri.004G201300 10.0kb upstream 10.0kb upstream 13124 true Chr04: 21248194-21261317 Populus trichocarpa
Potri.004G201300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 21251318-21261317 Populus trichocarpa
Potri.004G201300 10.0kb downstream 10.0kb downstream 13124 true Chr04: 21238194-21251317 Populus trichocarpa
Potri.004G201300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 21238194-21248193 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.374       High
cufflinks 0.008     Low Low
cufflinks 0.118     Low  
cufflinks 0.123     Low  
cufflinks 0.096     Low  
cufflinks 0.789       High
cufflinks 0.177        
cufflinks 0.141     Low  
cufflinks 0.031     Low  
cufflinks 0.135     Low  
cufflinks 0.051     Low  
cufflinks 0.227        
cufflinks 0.219        
cufflinks 0.022     Low Low
cufflinks 0.083     Low  
cufflinks 0.647       High
cufflinks 0.028     Low  
cufflinks 0.193        
cufflinks 0.062     Low  
cufflinks 0.012     Low Low
cufflinks 0.062     Low  
cufflinks 0.072     Low  
cufflinks 0.134     Low  
cufflinks 0.019     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain