Gene : Potri.004G154900 P. trichocarpa v3.0
Defline:  (1 of 2) K03941 - NADH dehydrogenase (ubiquinone) Fe-S protein 8 (NDUFS8) Genomic Order:  1549
Name:  ? Potri.004G154900 Secondary Identifier:  ? PAC:26989993
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5083 Populus trichocarpa pathologic  
Ptrichocarpa PWY-4302 Populus trichocarpa pathologic  
Ptrichocarpa PWY-3781 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G154900 0.5kb upstream 0.5kb upstream 3250 true Chr04: 17600718-17603967 Populus trichocarpa
Potri.004G154900 0.5kb upstream 0.5kb upstream 500 false Chr04: 17600718-17601217 Populus trichocarpa
Potri.004G154900 0.5kb downstream 0.5kb downstream 3250 true Chr04: 17601218-17604467 Populus trichocarpa
Potri.004G154900 0.5kb downstream 0.5kb downstream 500 false Chr04: 17603968-17604467 Populus trichocarpa
Potri.004G154900 1.0kb upstream 1.0kb upstream 3750 true Chr04: 17600218-17603967 Populus trichocarpa
Potri.004G154900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 17600218-17601217 Populus trichocarpa
Potri.004G154900 1.0kb downstream 1.0kb downstream 3750 true Chr04: 17601218-17604967 Populus trichocarpa
Potri.004G154900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 17603968-17604967 Populus trichocarpa
Potri.004G154900 2.0kb upstream 2.0kb upstream 4750 true Chr04: 17599218-17603967 Populus trichocarpa
Potri.004G154900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 17599218-17601217 Populus trichocarpa
Potri.004G154900 2.0kb downstream 2.0kb downstream 4750 true Chr04: 17601218-17605967 Populus trichocarpa
Potri.004G154900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 17603968-17605967 Populus trichocarpa
Potri.004G154900 5.0kb upstream 5.0kb upstream 7750 true Chr04: 17596218-17603967 Populus trichocarpa
Potri.004G154900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 17596218-17601217 Populus trichocarpa
Potri.004G154900 5.0kb downstream 5.0kb downstream 7750 true Chr04: 17601218-17608967 Populus trichocarpa
Potri.004G154900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 17603968-17608967 Populus trichocarpa
Potri.004G154900 10.0kb upstream 10.0kb upstream 12750 true Chr04: 17591218-17603967 Populus trichocarpa
Potri.004G154900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 17591218-17601217 Populus trichocarpa
Potri.004G154900 10.0kb downstream 10.0kb downstream 12750 true Chr04: 17601218-17613967 Populus trichocarpa
Potri.004G154900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 17603968-17613967 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.054     Low Low
cufflinks 0.074     Low  
cufflinks 0.259        
cufflinks 0.394        
cufflinks 0.582       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.081     Low  
cufflinks 0.324        
cufflinks 0.012     Low Low
cufflinks 0.268        
cufflinks 0.26        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.186        
cufflinks 0.212        
cufflinks 0.339        
cufflinks 0.443        
cufflinks 0.106     Low  
cufflinks 0.338        
cufflinks 0.664       High
cufflinks 0.438        
cufflinks 0.129     Low  
cufflinks 0.038     Low Low
cufflinks 0.645       High
cufflinks 0.041     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.036     Low  

0 Strain