Gene : Potri.004G217400 P. trichocarpa v3.0
Defline:  (1 of 1) PTHR12919:SF20 - 28S RIBOSOMAL PROTEIN S16, MITOCHONDRIAL Genomic Order:  2174
Name:  ? Potri.004G217400 Secondary Identifier:  ? PAC:26989553
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G217400 0.5kb upstream 0.5kb upstream 2919 true Chr04: 22408429-22411347 Populus trichocarpa
Potri.004G217400 0.5kb upstream 0.5kb upstream 500 false Chr04: 22410848-22411347 Populus trichocarpa
Potri.004G217400 0.5kb downstream 0.5kb downstream 2919 true Chr04: 22407929-22410847 Populus trichocarpa
Potri.004G217400 0.5kb downstream 0.5kb downstream 500 false Chr04: 22407929-22408428 Populus trichocarpa
Potri.004G217400 1.0kb upstream 1.0kb upstream 3419 true Chr04: 22408429-22411847 Populus trichocarpa
Potri.004G217400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 22410848-22411847 Populus trichocarpa
Potri.004G217400 1.0kb downstream 1.0kb downstream 3419 true Chr04: 22407429-22410847 Populus trichocarpa
Potri.004G217400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 22407429-22408428 Populus trichocarpa
Potri.004G217400 2.0kb upstream 2.0kb upstream 4419 true Chr04: 22408429-22412847 Populus trichocarpa
Potri.004G217400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 22410848-22412847 Populus trichocarpa
Potri.004G217400 2.0kb downstream 2.0kb downstream 4419 true Chr04: 22406429-22410847 Populus trichocarpa
Potri.004G217400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 22406429-22408428 Populus trichocarpa
Potri.004G217400 5.0kb upstream 5.0kb upstream 7419 true Chr04: 22408429-22415847 Populus trichocarpa
Potri.004G217400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 22410848-22415847 Populus trichocarpa
Potri.004G217400 5.0kb downstream 5.0kb downstream 7419 true Chr04: 22403429-22410847 Populus trichocarpa
Potri.004G217400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 22403429-22408428 Populus trichocarpa
Potri.004G217400 10.0kb upstream 10.0kb upstream 12419 true Chr04: 22408429-22420847 Populus trichocarpa
Potri.004G217400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 22410848-22420847 Populus trichocarpa
Potri.004G217400 10.0kb downstream 10.0kb downstream 12419 true Chr04: 22398429-22410847 Populus trichocarpa
Potri.004G217400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 22398429-22408428 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.1        
cufflinks 7.729        
cufflinks 7.969        
cufflinks 8.676        
cufflinks 10.953     High  
cufflinks 4.894       Low
cufflinks 11.299     High  
cufflinks 8.56     High  
cufflinks 10.819     High  
cufflinks 7.448        
cufflinks 8.197        
cufflinks 5.772       Low
cufflinks 8.414        
cufflinks 6.996        
cufflinks 9.162        
cufflinks 11.975     High High
cufflinks 14.295     High High
cufflinks 12.447     High High
cufflinks 8.293        
cufflinks 7.805        
cufflinks 7.383        
cufflinks 14.128     High High
cufflinks 11.445     High  
cufflinks 8.229        
cufflinks 11.804        
cufflinks 7.875        
cufflinks 10.519        
cufflinks 16.931        
cufflinks 24.021       High
cufflinks 10.106        

0 Strain