Gene : Potri.004G041900 P. trichocarpa v3.0
Defline:  (1 of 1) K07456 - DNA mismatch repair protein MutS2 (mutS2) Genomic Order:  419
Name:  ? Potri.004G041900 Secondary Identifier:  ? PAC:26991791
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G041900 0.5kb upstream 0.5kb upstream 4830 true Chr04: 3196492-3201321 Populus trichocarpa
Potri.004G041900 0.5kb upstream 0.5kb upstream 500 false Chr04: 3196492-3196991 Populus trichocarpa
Potri.004G041900 0.5kb downstream 0.5kb downstream 4830 true Chr04: 3196992-3201821 Populus trichocarpa
Potri.004G041900 0.5kb downstream 0.5kb downstream 500 false Chr04: 3201322-3201821 Populus trichocarpa
Potri.004G041900 1.0kb upstream 1.0kb upstream 5330 true Chr04: 3195992-3201321 Populus trichocarpa
Potri.004G041900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3195992-3196991 Populus trichocarpa
Potri.004G041900 1.0kb downstream 1.0kb downstream 5330 true Chr04: 3196992-3202321 Populus trichocarpa
Potri.004G041900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3201322-3202321 Populus trichocarpa
Potri.004G041900 2.0kb upstream 2.0kb upstream 6330 true Chr04: 3194992-3201321 Populus trichocarpa
Potri.004G041900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3194992-3196991 Populus trichocarpa
Potri.004G041900 2.0kb downstream 2.0kb downstream 6330 true Chr04: 3196992-3203321 Populus trichocarpa
Potri.004G041900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3201322-3203321 Populus trichocarpa
Potri.004G041900 5.0kb upstream 5.0kb upstream 9330 true Chr04: 3191992-3201321 Populus trichocarpa
Potri.004G041900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3191992-3196991 Populus trichocarpa
Potri.004G041900 5.0kb downstream 5.0kb downstream 9330 true Chr04: 3196992-3206321 Populus trichocarpa
Potri.004G041900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3201322-3206321 Populus trichocarpa
Potri.004G041900 10.0kb upstream 10.0kb upstream 14330 true Chr04: 3186992-3201321 Populus trichocarpa
Potri.004G041900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3186992-3196991 Populus trichocarpa
Potri.004G041900 10.0kb downstream 10.0kb downstream 14330 true Chr04: 3196992-3211321 Populus trichocarpa
Potri.004G041900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3201322-3211321 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.874        
cufflinks 0.387        
cufflinks 0.201       Low
cufflinks 0.118     Low Low
cufflinks 1.024        
cufflinks 0.94        
cufflinks 0.299       Low
cufflinks 2.11       High
cufflinks 0.756        
cufflinks 0.337        
cufflinks 1.321        
cufflinks 0.92        
cufflinks 0.546        
cufflinks 1.584        
cufflinks 2.292       High
cufflinks 0.247       Low
cufflinks 1.694        
cufflinks 1.945       High
cufflinks 4.096       High
cufflinks 0.28       Low
cufflinks 0.598        
cufflinks 1.249        
cufflinks 1.481        
cufflinks 0.868        
cufflinks 9.548        
cufflinks 16.512       High
cufflinks 16.253       High
cufflinks 13.42        
cufflinks 10.105        
cufflinks 12.372        

0 Strain