Gene : Potri.004G195800 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR10617//PTHR10617:SF118 - ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE // SUBFAMILY NOT NAMED Genomic Order:  1958
Name:  ? Potri.004G195800 Secondary Identifier:  ? PAC:26992290
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5063 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5064 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G195800 0.5kb upstream 0.5kb upstream 2546 true Chr04: 20900407-20902952 Populus trichocarpa
Potri.004G195800 0.5kb upstream 0.5kb upstream 500 false Chr04: 20902453-20902952 Populus trichocarpa
Potri.004G195800 0.5kb downstream 0.5kb downstream 2546 true Chr04: 20899907-20902452 Populus trichocarpa
Potri.004G195800 0.5kb downstream 0.5kb downstream 500 false Chr04: 20899907-20900406 Populus trichocarpa
Potri.004G195800 1.0kb upstream 1.0kb upstream 3046 true Chr04: 20900407-20903452 Populus trichocarpa
Potri.004G195800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 20902453-20903452 Populus trichocarpa
Potri.004G195800 1.0kb downstream 1.0kb downstream 3046 true Chr04: 20899407-20902452 Populus trichocarpa
Potri.004G195800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 20899407-20900406 Populus trichocarpa
Potri.004G195800 2.0kb upstream 2.0kb upstream 4046 true Chr04: 20900407-20904452 Populus trichocarpa
Potri.004G195800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 20902453-20904452 Populus trichocarpa
Potri.004G195800 2.0kb downstream 2.0kb downstream 4046 true Chr04: 20898407-20902452 Populus trichocarpa
Potri.004G195800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 20898407-20900406 Populus trichocarpa
Potri.004G195800 5.0kb upstream 5.0kb upstream 7046 true Chr04: 20900407-20907452 Populus trichocarpa
Potri.004G195800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 20902453-20907452 Populus trichocarpa
Potri.004G195800 5.0kb downstream 5.0kb downstream 7046 true Chr04: 20895407-20902452 Populus trichocarpa
Potri.004G195800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 20895407-20900406 Populus trichocarpa
Potri.004G195800 10.0kb upstream 10.0kb upstream 12046 true Chr04: 20900407-20912452 Populus trichocarpa
Potri.004G195800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 20902453-20912452 Populus trichocarpa
Potri.004G195800 10.0kb downstream 10.0kb downstream 12046 true Chr04: 20890407-20902452 Populus trichocarpa
Potri.004G195800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 20890407-20900406 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.041        
cufflinks 18.454     High High
cufflinks 13.243     High  
cufflinks 5.192        
cufflinks 11.377     High  
cufflinks 5.27        
cufflinks 3.757       Low
cufflinks 12.967     High  
cufflinks 7.368        
cufflinks 4.377        
cufflinks 13.075     High  
cufflinks 11.657     High  
cufflinks 12.219     High  
cufflinks 5.128        
cufflinks 2.626       Low
cufflinks 4.467        
cufflinks 2.47       Low
cufflinks 5.077        
cufflinks 8.922        
cufflinks 13.763     High High
cufflinks 15.617     High High
cufflinks 13.564     High  
cufflinks 4.404        
cufflinks 3.141       Low
cufflinks 11.347     High  
cufflinks 2.024       Low
cufflinks 8.878       High
cufflinks 4.55        
cufflinks 6.343        
cufflinks 5.523        

0 Strain