Gene : Potri.004G133800 P. trichocarpa v3.0
Defline:  (1 of 3) K09495 - T-complex protein 1 subunit gamma (CCT3, TRIC5) Genomic Order:  1338
Name:  ? Potri.004G133800 Secondary Identifier:  ? PAC:26992253
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G133800 0.5kb upstream 0.5kb upstream 4906 true Chr04: 15402664-15407569 Populus trichocarpa
Potri.004G133800 0.5kb upstream 0.5kb upstream 500 false Chr04: 15402664-15403163 Populus trichocarpa
Potri.004G133800 0.5kb downstream 0.5kb downstream 4906 true Chr04: 15403164-15408069 Populus trichocarpa
Potri.004G133800 0.5kb downstream 0.5kb downstream 500 false Chr04: 15407570-15408069 Populus trichocarpa
Potri.004G133800 1.0kb upstream 1.0kb upstream 5406 true Chr04: 15402164-15407569 Populus trichocarpa
Potri.004G133800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 15402164-15403163 Populus trichocarpa
Potri.004G133800 1.0kb downstream 1.0kb downstream 5406 true Chr04: 15403164-15408569 Populus trichocarpa
Potri.004G133800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 15407570-15408569 Populus trichocarpa
Potri.004G133800 2.0kb upstream 2.0kb upstream 6406 true Chr04: 15401164-15407569 Populus trichocarpa
Potri.004G133800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 15401164-15403163 Populus trichocarpa
Potri.004G133800 2.0kb downstream 2.0kb downstream 6406 true Chr04: 15403164-15409569 Populus trichocarpa
Potri.004G133800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 15407570-15409569 Populus trichocarpa
Potri.004G133800 5.0kb upstream 5.0kb upstream 9406 true Chr04: 15398164-15407569 Populus trichocarpa
Potri.004G133800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 15398164-15403163 Populus trichocarpa
Potri.004G133800 5.0kb downstream 5.0kb downstream 9406 true Chr04: 15403164-15412569 Populus trichocarpa
Potri.004G133800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 15407570-15412569 Populus trichocarpa
Potri.004G133800 10.0kb upstream 10.0kb upstream 14406 true Chr04: 15393164-15407569 Populus trichocarpa
Potri.004G133800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 15393164-15403163 Populus trichocarpa
Potri.004G133800 10.0kb downstream 10.0kb downstream 14406 true Chr04: 15403164-15417569 Populus trichocarpa
Potri.004G133800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 15407570-15417569 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.024     High Low
cufflinks 19.956     High  
cufflinks 24.767     High  
cufflinks 14.343     High Low
cufflinks 19.157     High  
cufflinks 24.814     High  
cufflinks 30.151     High  
cufflinks 11.723     High Low
cufflinks 20.956     High  
cufflinks 18.055     High  
cufflinks 27.136     High  
cufflinks 28.555     High  
cufflinks 21.468     High  
cufflinks 21.484     High  
cufflinks 32.478     High High
cufflinks 26.267     High  
cufflinks 30.446     High  
cufflinks 30.717     High High
cufflinks 21.084     High  
cufflinks 29.796     High  
cufflinks 31.976     High High
cufflinks 24.0     High  
cufflinks 28.41     High  
cufflinks 24.897     High  
cufflinks 32.119     High  
cufflinks 36.485     High  
cufflinks 38.157     High  
cufflinks 50.859     High  
cufflinks 56.154     High  
cufflinks 32.326     High  

0 Strain