Gene : Potri.T173300 P. trichocarpa v3.0
Defline:  (1 of 3) K08343 - ubiquitin-like-conjugating enzyme ATG3 (ATG3) Genomic Order:  1
Name:  ? Potri.T173300 Secondary Identifier:  ? PAC:27040097
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.T173300 0.5kb upstream 0.5kb upstream 5746 true scaffold_1243: 2697-8442 Populus trichocarpa
Potri.T173300 0.5kb upstream 0.5kb upstream 500 false scaffold_1243: 2697-3196 Populus trichocarpa
Potri.T173300 0.5kb downstream 0.5kb downstream 5746 true scaffold_1243: 3197-8942 Populus trichocarpa
Potri.T173300 0.5kb downstream 0.5kb downstream 500 false scaffold_1243: 8443-8942 Populus trichocarpa
Potri.T173300 1.0kb upstream 1.0kb upstream 6246 true scaffold_1243: 2197-8442 Populus trichocarpa
Potri.T173300 1.0kb upstream 1.0kb upstream 1000 false scaffold_1243: 2197-3196 Populus trichocarpa
Potri.T173300 1.0kb downstream 1.0kb downstream 6246 true scaffold_1243: 3197-9442 Populus trichocarpa
Potri.T173300 1.0kb downstream 1.0kb downstream 1000 false scaffold_1243: 8443-9442 Populus trichocarpa
Potri.T173300 2.0kb upstream 2.0kb upstream 7246 true scaffold_1243: 1197-8442 Populus trichocarpa
Potri.T173300 2.0kb upstream 2.0kb upstream 2000 false scaffold_1243: 1197-3196 Populus trichocarpa
Potri.T173300 2.0kb downstream 2.0kb downstream 7246 true scaffold_1243: 3197-10442 Populus trichocarpa
Potri.T173300 2.0kb downstream 2.0kb downstream 2000 false scaffold_1243: 8443-10442 Populus trichocarpa
Potri.T173300 5.0kb upstream 5.0kb upstream 8442 true scaffold_1243: 1-8442 Populus trichocarpa
Potri.T173300 5.0kb upstream 5.0kb upstream 3196 false scaffold_1243: 1-3196 Populus trichocarpa
Potri.T173300 5.0kb downstream 5.0kb downstream 7595 true scaffold_1243: 3197-10791 Populus trichocarpa
Potri.T173300 5.0kb downstream 5.0kb downstream 2349 false scaffold_1243: 8443-10791 Populus trichocarpa
Potri.T173300 10.0kb upstream 10.0kb upstream 8442 true scaffold_1243: 1-8442 Populus trichocarpa
Potri.T173300 10.0kb upstream 10.0kb upstream 3196 false scaffold_1243: 1-3196 Populus trichocarpa
Potri.T173300 10.0kb downstream 10.0kb downstream 7595 true scaffold_1243: 3197-10791 Populus trichocarpa
Potri.T173300 10.0kb downstream 10.0kb downstream 2349 false scaffold_1243: 8443-10791 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.049        
cufflinks 0.355        
cufflinks 1.005        
cufflinks 1.026        
cufflinks 0.836        
cufflinks 0.65        
cufflinks 0.923        
cufflinks 0.6        
cufflinks 1.7       High
cufflinks 0.995        
cufflinks 0.726        
cufflinks 1.094        
cufflinks 0.584        
cufflinks 0.716        
cufflinks 0.2       Low
cufflinks 0.125     Low Low
cufflinks 0.782        
cufflinks 0.9        
cufflinks 0.756        
cufflinks 1.466       High
cufflinks 0.787        
cufflinks 0.096     Low Low
cufflinks 1.119        
cufflinks 0.561        
cufflinks 1.808        
cufflinks 1.979        
cufflinks 1.723        
cufflinks 2.197        
cufflinks 3.78       High
cufflinks 3.951       High

0 Strain