Gene : Potri.004G082800 P. trichocarpa v3.0
Defline:  (1 of 1) K03934 - NADH dehydrogenase (ubiquinone) Fe-S protein 1 (NDUFS1) Genomic Order:  828
Name:  ? Potri.004G082800 Secondary Identifier:  ? PAC:26990681
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5083 Populus trichocarpa pathologic  
Ptrichocarpa PWY-4302 Populus trichocarpa pathologic  
Ptrichocarpa PWY-3781 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G082800 0.5kb upstream 0.5kb upstream 7149 true Chr04: 6828739-6835887 Populus trichocarpa
Potri.004G082800 0.5kb upstream 0.5kb upstream 500 false Chr04: 6835388-6835887 Populus trichocarpa
Potri.004G082800 0.5kb downstream 0.5kb downstream 7149 true Chr04: 6828239-6835387 Populus trichocarpa
Potri.004G082800 0.5kb downstream 0.5kb downstream 500 false Chr04: 6828239-6828738 Populus trichocarpa
Potri.004G082800 1.0kb upstream 1.0kb upstream 7649 true Chr04: 6828739-6836387 Populus trichocarpa
Potri.004G082800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6835388-6836387 Populus trichocarpa
Potri.004G082800 1.0kb downstream 1.0kb downstream 7649 true Chr04: 6827739-6835387 Populus trichocarpa
Potri.004G082800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 6827739-6828738 Populus trichocarpa
Potri.004G082800 2.0kb upstream 2.0kb upstream 8649 true Chr04: 6828739-6837387 Populus trichocarpa
Potri.004G082800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6835388-6837387 Populus trichocarpa
Potri.004G082800 2.0kb downstream 2.0kb downstream 8649 true Chr04: 6826739-6835387 Populus trichocarpa
Potri.004G082800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 6826739-6828738 Populus trichocarpa
Potri.004G082800 5.0kb upstream 5.0kb upstream 11649 true Chr04: 6828739-6840387 Populus trichocarpa
Potri.004G082800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6835388-6840387 Populus trichocarpa
Potri.004G082800 5.0kb downstream 5.0kb downstream 11649 true Chr04: 6823739-6835387 Populus trichocarpa
Potri.004G082800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 6823739-6828738 Populus trichocarpa
Potri.004G082800 10.0kb upstream 10.0kb upstream 16649 true Chr04: 6828739-6845387 Populus trichocarpa
Potri.004G082800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6835388-6845387 Populus trichocarpa
Potri.004G082800 10.0kb downstream 10.0kb downstream 16649 true Chr04: 6818739-6835387 Populus trichocarpa
Potri.004G082800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 6818739-6828738 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.156     High Low
cufflinks 14.757     High Low
cufflinks 16.779     High  
cufflinks 14.738     High Low
cufflinks 17.887     High  
cufflinks 19.846     High  
cufflinks 27.101     High High
cufflinks 19.546     High  
cufflinks 26.64     High High
cufflinks 17.93     High  
cufflinks 22.04     High  
cufflinks 23.3     High  
cufflinks 27.163     High High
cufflinks 25.439     High High
cufflinks 19.082     High  
cufflinks 20.172     High  
cufflinks 20.48     High  
cufflinks 18.458     High  
cufflinks 16.652     High  
cufflinks 19.226     High  
cufflinks 15.264     High Low
cufflinks 19.902     High  
cufflinks 17.334     High  
cufflinks 19.408     High  
cufflinks 29.992     High Low
cufflinks 37.278     High  
cufflinks 34.573     High  
cufflinks 33.138     High  
cufflinks 33.817     High  
cufflinks 32.929     High  

0 Strain