Gene : Potri.005G253800 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR18966//PTHR18966:SF186 - IONOTROPIC GLUTAMATE RECEPTOR // SUBFAMILY NOT NAMED Genomic Order:  2538
Name:  ? Potri.005G253800 Secondary Identifier:  ? PAC:27029480
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G253800 0.5kb upstream 0.5kb upstream 6185 true Chr05: 25501557-25507741 Populus trichocarpa
Potri.005G253800 0.5kb upstream 0.5kb upstream 500 false Chr05: 25501557-25502056 Populus trichocarpa
Potri.005G253800 0.5kb downstream 0.5kb downstream 6185 true Chr05: 25502057-25508241 Populus trichocarpa
Potri.005G253800 0.5kb downstream 0.5kb downstream 500 false Chr05: 25507742-25508241 Populus trichocarpa
Potri.005G253800 1.0kb upstream 1.0kb upstream 6685 true Chr05: 25501057-25507741 Populus trichocarpa
Potri.005G253800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 25501057-25502056 Populus trichocarpa
Potri.005G253800 1.0kb downstream 1.0kb downstream 6685 true Chr05: 25502057-25508741 Populus trichocarpa
Potri.005G253800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 25507742-25508741 Populus trichocarpa
Potri.005G253800 2.0kb upstream 2.0kb upstream 7685 true Chr05: 25500057-25507741 Populus trichocarpa
Potri.005G253800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 25500057-25502056 Populus trichocarpa
Potri.005G253800 2.0kb downstream 2.0kb downstream 7685 true Chr05: 25502057-25509741 Populus trichocarpa
Potri.005G253800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 25507742-25509741 Populus trichocarpa
Potri.005G253800 5.0kb upstream 5.0kb upstream 10685 true Chr05: 25497057-25507741 Populus trichocarpa
Potri.005G253800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 25497057-25502056 Populus trichocarpa
Potri.005G253800 5.0kb downstream 5.0kb downstream 10685 true Chr05: 25502057-25512741 Populus trichocarpa
Potri.005G253800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 25507742-25512741 Populus trichocarpa
Potri.005G253800 10.0kb upstream 10.0kb upstream 15685 true Chr05: 25492057-25507741 Populus trichocarpa
Potri.005G253800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 25492057-25502056 Populus trichocarpa
Potri.005G253800 10.0kb downstream 10.0kb downstream 15685 true Chr05: 25502057-25517741 Populus trichocarpa
Potri.005G253800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 25507742-25517741 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.42       Low
cufflinks 0.907        
cufflinks 1.46       High
cufflinks 0.534       Low
cufflinks 0.953        
cufflinks 1.27        
cufflinks 0.832        
cufflinks 0.506       Low
cufflinks 0.687        
cufflinks 1.041        
cufflinks 0.824        
cufflinks 0.561       Low
cufflinks 1.421       High
cufflinks 0.499       Low
cufflinks 0.743        
cufflinks 1.344       High
cufflinks 1.885       High
cufflinks 1.359       High
cufflinks 1.044        
cufflinks 0.883        
cufflinks 0.589        
cufflinks 1.277        
cufflinks 0.636        
cufflinks 0.992        
cufflinks 13.302        
cufflinks 20.615       High
cufflinks 18.609       High
cufflinks 14.883        
cufflinks 12.152        
cufflinks 15.877        

0 Strain