Gene : Potri.005G130400 P. trichocarpa v3.0
Defline:  (1 of 2) K02716 - photosystem II oxygen-evolving enhancer protein 1 (psbO) Genomic Order:  1304
Name:  ? Potri.005G130400 Secondary Identifier:  ? PAC:27027369
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G130400 0.5kb upstream 0.5kb upstream 2309 true Chr05: 10468202-10470510 Populus trichocarpa
Potri.005G130400 0.5kb upstream 0.5kb upstream 500 false Chr05: 10470011-10470510 Populus trichocarpa
Potri.005G130400 0.5kb downstream 0.5kb downstream 2309 true Chr05: 10467702-10470010 Populus trichocarpa
Potri.005G130400 0.5kb downstream 0.5kb downstream 500 false Chr05: 10467702-10468201 Populus trichocarpa
Potri.005G130400 1.0kb upstream 1.0kb upstream 2809 true Chr05: 10468202-10471010 Populus trichocarpa
Potri.005G130400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 10470011-10471010 Populus trichocarpa
Potri.005G130400 1.0kb downstream 1.0kb downstream 2809 true Chr05: 10467202-10470010 Populus trichocarpa
Potri.005G130400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 10467202-10468201 Populus trichocarpa
Potri.005G130400 2.0kb upstream 2.0kb upstream 3809 true Chr05: 10468202-10472010 Populus trichocarpa
Potri.005G130400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 10470011-10472010 Populus trichocarpa
Potri.005G130400 2.0kb downstream 2.0kb downstream 3809 true Chr05: 10466202-10470010 Populus trichocarpa
Potri.005G130400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 10466202-10468201 Populus trichocarpa
Potri.005G130400 5.0kb upstream 5.0kb upstream 6809 true Chr05: 10468202-10475010 Populus trichocarpa
Potri.005G130400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 10470011-10475010 Populus trichocarpa
Potri.005G130400 5.0kb downstream 5.0kb downstream 6809 true Chr05: 10463202-10470010 Populus trichocarpa
Potri.005G130400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 10463202-10468201 Populus trichocarpa
Potri.005G130400 10.0kb upstream 10.0kb upstream 11809 true Chr05: 10468202-10480010 Populus trichocarpa
Potri.005G130400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 10470011-10480010 Populus trichocarpa
Potri.005G130400 10.0kb downstream 10.0kb downstream 11809 true Chr05: 10458202-10470010 Populus trichocarpa
Potri.005G130400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 10458202-10468201 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 66.41     High  
cufflinks 19.774     High  
cufflinks 260.064     High High
cufflinks 3.429       Low
cufflinks 327.577     High High
cufflinks 4.48       Low
cufflinks 51.46     High  
cufflinks 21.503     High  
cufflinks 4.175       Low
cufflinks 59.519     High  
cufflinks 188.347     High  
cufflinks 81.303     High  
cufflinks 59.07     High  
cufflinks 1.661       Low
cufflinks 230.011     High High
cufflinks 285.819     High High
cufflinks 36.676     High  
cufflinks 47.283     High  
cufflinks 128.961     High  
cufflinks 282.121     High High
cufflinks 67.205     High  
cufflinks 28.735     High  
cufflinks 65.555     High  
cufflinks 132.719     High  
cufflinks 156.373     High  
cufflinks 265.672     High High
cufflinks 317.862     High High
cufflinks 241.97     High  
cufflinks 172.851     High  
cufflinks 180.579     High  

0 Strain