Gene : Potri.004G226700 P. trichocarpa v3.0
Defline:  (1 of 3) K01869 - leucyl-tRNA synthetase (LARS, leuS) Genomic Order:  2267
Name:  ? Potri.004G226700 Secondary Identifier:  ? PAC:26989833
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRNA-CHARGING-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G226700 0.5kb upstream 0.5kb upstream 6313 true Chr04: 23219514-23225826 Populus trichocarpa
Potri.004G226700 0.5kb upstream 0.5kb upstream 500 false Chr04: 23219514-23220013 Populus trichocarpa
Potri.004G226700 0.5kb downstream 0.5kb downstream 6313 true Chr04: 23220014-23226326 Populus trichocarpa
Potri.004G226700 0.5kb downstream 0.5kb downstream 500 false Chr04: 23225827-23226326 Populus trichocarpa
Potri.004G226700 1.0kb upstream 1.0kb upstream 6813 true Chr04: 23219014-23225826 Populus trichocarpa
Potri.004G226700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 23219014-23220013 Populus trichocarpa
Potri.004G226700 1.0kb downstream 1.0kb downstream 6813 true Chr04: 23220014-23226826 Populus trichocarpa
Potri.004G226700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 23225827-23226826 Populus trichocarpa
Potri.004G226700 2.0kb upstream 2.0kb upstream 7813 true Chr04: 23218014-23225826 Populus trichocarpa
Potri.004G226700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 23218014-23220013 Populus trichocarpa
Potri.004G226700 2.0kb downstream 2.0kb downstream 7813 true Chr04: 23220014-23227826 Populus trichocarpa
Potri.004G226700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 23225827-23227826 Populus trichocarpa
Potri.004G226700 5.0kb upstream 5.0kb upstream 10813 true Chr04: 23215014-23225826 Populus trichocarpa
Potri.004G226700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 23215014-23220013 Populus trichocarpa
Potri.004G226700 5.0kb downstream 5.0kb downstream 10813 true Chr04: 23220014-23230826 Populus trichocarpa
Potri.004G226700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 23225827-23230826 Populus trichocarpa
Potri.004G226700 10.0kb upstream 10.0kb upstream 15813 true Chr04: 23210014-23225826 Populus trichocarpa
Potri.004G226700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 23210014-23220013 Populus trichocarpa
Potri.004G226700 10.0kb downstream 10.0kb downstream 15813 true Chr04: 23220014-23235826 Populus trichocarpa
Potri.004G226700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 23225827-23235826 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.348     High Low
cufflinks 34.265     High  
cufflinks 29.256     High  
cufflinks 40.13     High  
cufflinks 70.059     High High
cufflinks 23.367     High  
cufflinks 36.247     High  
cufflinks 17.946     High Low
cufflinks 38.358     High  
cufflinks 23.535     High  
cufflinks 26.522     High  
cufflinks 24.337     High  
cufflinks 26.159     High  
cufflinks 32.935     High  
cufflinks 35.978     High  
cufflinks 24.933     High  
cufflinks 18.987     High Low
cufflinks 19.535     High Low
cufflinks 27.547     High  
cufflinks 37.31     High  
cufflinks 24.15     High  
cufflinks 43.587     High High
cufflinks 31.616     High  
cufflinks 35.79     High  
cufflinks 46.999     High Low
cufflinks 74.487     High High
cufflinks 65.009     High  
cufflinks 59.664     High  
cufflinks 48.116     High Low
cufflinks 61.831     High  

0 Strain