Gene : Potri.005G091600 P. trichocarpa v3.0
Defline:  (1 of 2) 2.5.1.61 - Hydroxymethylbilane synthase / Uroporphyrinogen synthetase Genomic Order:  916
Name:  ? Potri.005G091600 Secondary Identifier:  ? PAC:27029840
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5918 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5188 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G091600 0.5kb upstream 0.5kb upstream 5549 true Chr05: 6812960-6818508 Populus trichocarpa
Potri.005G091600 0.5kb upstream 0.5kb upstream 500 false Chr05: 6812960-6813459 Populus trichocarpa
Potri.005G091600 0.5kb downstream 0.5kb downstream 5549 true Chr05: 6813460-6819008 Populus trichocarpa
Potri.005G091600 0.5kb downstream 0.5kb downstream 500 false Chr05: 6818509-6819008 Populus trichocarpa
Potri.005G091600 1.0kb upstream 1.0kb upstream 6049 true Chr05: 6812460-6818508 Populus trichocarpa
Potri.005G091600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 6812460-6813459 Populus trichocarpa
Potri.005G091600 1.0kb downstream 1.0kb downstream 6049 true Chr05: 6813460-6819508 Populus trichocarpa
Potri.005G091600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 6818509-6819508 Populus trichocarpa
Potri.005G091600 2.0kb upstream 2.0kb upstream 7049 true Chr05: 6811460-6818508 Populus trichocarpa
Potri.005G091600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 6811460-6813459 Populus trichocarpa
Potri.005G091600 2.0kb downstream 2.0kb downstream 7049 true Chr05: 6813460-6820508 Populus trichocarpa
Potri.005G091600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 6818509-6820508 Populus trichocarpa
Potri.005G091600 5.0kb upstream 5.0kb upstream 10049 true Chr05: 6808460-6818508 Populus trichocarpa
Potri.005G091600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 6808460-6813459 Populus trichocarpa
Potri.005G091600 5.0kb downstream 5.0kb downstream 10049 true Chr05: 6813460-6823508 Populus trichocarpa
Potri.005G091600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 6818509-6823508 Populus trichocarpa
Potri.005G091600 10.0kb upstream 10.0kb upstream 15049 true Chr05: 6803460-6818508 Populus trichocarpa
Potri.005G091600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 6803460-6813459 Populus trichocarpa
Potri.005G091600 10.0kb downstream 10.0kb downstream 15049 true Chr05: 6813460-6828508 Populus trichocarpa
Potri.005G091600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 6818509-6828508 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.296        
cufflinks 1.429       Low
cufflinks 11.103     High High
cufflinks 1.641        
cufflinks 5.189        
cufflinks 1.738        
cufflinks 2.289        
cufflinks 1.098       Low
cufflinks 1.837        
cufflinks 4.955        
cufflinks 5.102        
cufflinks 2.609        
cufflinks 2.168        
cufflinks 2.025        
cufflinks 4.433        
cufflinks 6.095       High
cufflinks 1.341       Low
cufflinks 5.992       High
cufflinks 1.645        
cufflinks 4.906        
cufflinks 2.278        
cufflinks 1.968        
cufflinks 7.104       High
cufflinks 4.17        
cufflinks 6.067       High
cufflinks 11.685        
cufflinks 14.348        
cufflinks 18.428        
cufflinks 14.052        
cufflinks 14.148        

0 Strain