Gene : Potri.005G110500 P. trichocarpa v3.0
Defline:  (1 of 2) KOG0804 - Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) Genomic Order:  1105
Name:  ? Potri.005G110500 Secondary Identifier:  ? PAC:27029243
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G110500 0.5kb upstream 0.5kb upstream 9960 true Chr05: 8498394-8508353 Populus trichocarpa
Potri.005G110500 0.5kb upstream 0.5kb upstream 500 false Chr05: 8507854-8508353 Populus trichocarpa
Potri.005G110500 0.5kb downstream 0.5kb downstream 9960 true Chr05: 8497894-8507853 Populus trichocarpa
Potri.005G110500 0.5kb downstream 0.5kb downstream 500 false Chr05: 8497894-8498393 Populus trichocarpa
Potri.005G110500 1.0kb upstream 1.0kb upstream 10460 true Chr05: 8498394-8508853 Populus trichocarpa
Potri.005G110500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 8507854-8508853 Populus trichocarpa
Potri.005G110500 1.0kb downstream 1.0kb downstream 10460 true Chr05: 8497394-8507853 Populus trichocarpa
Potri.005G110500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 8497394-8498393 Populus trichocarpa
Potri.005G110500 2.0kb upstream 2.0kb upstream 11460 true Chr05: 8498394-8509853 Populus trichocarpa
Potri.005G110500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 8507854-8509853 Populus trichocarpa
Potri.005G110500 2.0kb downstream 2.0kb downstream 11460 true Chr05: 8496394-8507853 Populus trichocarpa
Potri.005G110500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 8496394-8498393 Populus trichocarpa
Potri.005G110500 5.0kb upstream 5.0kb upstream 14460 true Chr05: 8498394-8512853 Populus trichocarpa
Potri.005G110500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 8507854-8512853 Populus trichocarpa
Potri.005G110500 5.0kb downstream 5.0kb downstream 14460 true Chr05: 8493394-8507853 Populus trichocarpa
Potri.005G110500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 8493394-8498393 Populus trichocarpa
Potri.005G110500 10.0kb upstream 10.0kb upstream 19460 true Chr05: 8498394-8517853 Populus trichocarpa
Potri.005G110500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 8507854-8517853 Populus trichocarpa
Potri.005G110500 10.0kb downstream 10.0kb downstream 19460 true Chr05: 8488394-8507853 Populus trichocarpa
Potri.005G110500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 8488394-8498393 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.956        
cufflinks 0.48        
cufflinks 0.203       Low
cufflinks 0.504       High
cufflinks 0.38        
cufflinks 0.227        
cufflinks 0.476        
cufflinks 0.438        
cufflinks 0.423        
cufflinks 0.439        
cufflinks 0.436        
cufflinks 0.562       High
cufflinks 0.477        
cufflinks 0.136     Low Low
cufflinks 0.238        
cufflinks 0.252        
cufflinks 0.464        
cufflinks 0.52       High
cufflinks 0.198       Low
cufflinks 0.29        
cufflinks 0.173       Low
cufflinks 0.419        
cufflinks 0.359        
cufflinks 0.229        
cufflinks 0.345        
cufflinks 7.765        
cufflinks 6.873        
cufflinks 6.411        
cufflinks 8.598       High
cufflinks 6.557        

0 Strain