Gene : Potri.005G093600 P. trichocarpa v3.0
Defline:  (1 of 2) 2.5.1.39 - 4-hydroxybenzoate polyprenyltransferase / 4-hydroxybenzoate nonaprenyltransferase Genomic Order:  936
Name:  ? Potri.005G093600 Secondary Identifier:  ? PAC:27029237
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5872 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5871 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G093600 0.5kb upstream 0.5kb upstream 3126 true Chr05: 7005096-7008221 Populus trichocarpa
Potri.005G093600 0.5kb upstream 0.5kb upstream 500 false Chr05: 7005096-7005595 Populus trichocarpa
Potri.005G093600 0.5kb downstream 0.5kb downstream 3126 true Chr05: 7005596-7008721 Populus trichocarpa
Potri.005G093600 0.5kb downstream 0.5kb downstream 500 false Chr05: 7008222-7008721 Populus trichocarpa
Potri.005G093600 1.0kb upstream 1.0kb upstream 3626 true Chr05: 7004596-7008221 Populus trichocarpa
Potri.005G093600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 7004596-7005595 Populus trichocarpa
Potri.005G093600 1.0kb downstream 1.0kb downstream 3626 true Chr05: 7005596-7009221 Populus trichocarpa
Potri.005G093600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 7008222-7009221 Populus trichocarpa
Potri.005G093600 2.0kb upstream 2.0kb upstream 4626 true Chr05: 7003596-7008221 Populus trichocarpa
Potri.005G093600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 7003596-7005595 Populus trichocarpa
Potri.005G093600 2.0kb downstream 2.0kb downstream 4626 true Chr05: 7005596-7010221 Populus trichocarpa
Potri.005G093600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 7008222-7010221 Populus trichocarpa
Potri.005G093600 5.0kb upstream 5.0kb upstream 7626 true Chr05: 7000596-7008221 Populus trichocarpa
Potri.005G093600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 7000596-7005595 Populus trichocarpa
Potri.005G093600 5.0kb downstream 5.0kb downstream 7626 true Chr05: 7005596-7013221 Populus trichocarpa
Potri.005G093600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 7008222-7013221 Populus trichocarpa
Potri.005G093600 10.0kb upstream 10.0kb upstream 12626 true Chr05: 6995596-7008221 Populus trichocarpa
Potri.005G093600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 6995596-7005595 Populus trichocarpa
Potri.005G093600 10.0kb downstream 10.0kb downstream 12626 true Chr05: 7005596-7018221 Populus trichocarpa
Potri.005G093600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 7008222-7018221 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.019     High High
cufflinks 15.517     High  
cufflinks 3.633       Low
cufflinks 14.071     High  
cufflinks 12.817     High  
cufflinks 5.99        
cufflinks 14.738     High  
cufflinks 10.538     High  
cufflinks 6.503        
cufflinks 16.971     High High
cufflinks 11.17     High  
cufflinks 15.526     High  
cufflinks 6.319        
cufflinks 3.799       Low
cufflinks 4.841       Low
cufflinks 14.265     High  
cufflinks 14.617     High  
cufflinks 4.127       Low
cufflinks 14.456     High  
cufflinks 4.199       Low
cufflinks 7.816        
cufflinks 14.491     High  
cufflinks 7.932        
cufflinks 14.605     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain