Gene : Potri.005G093700 P. trichocarpa v3.0
Defline:  (1 of 2) 2.5.1.39 - 4-hydroxybenzoate polyprenyltransferase / 4-hydroxybenzoate nonaprenyltransferase Genomic Order:  937
Name:  ? Potri.005G093700 Secondary Identifier:  ? PAC:27028677
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5872 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5871 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G093700 0.5kb upstream 0.5kb upstream 4114 true Chr05: 7008290-7012403 Populus trichocarpa
Potri.005G093700 0.5kb upstream 0.5kb upstream 500 false Chr05: 7008290-7008789 Populus trichocarpa
Potri.005G093700 0.5kb downstream 0.5kb downstream 4114 true Chr05: 7008790-7012903 Populus trichocarpa
Potri.005G093700 0.5kb downstream 0.5kb downstream 500 false Chr05: 7012404-7012903 Populus trichocarpa
Potri.005G093700 1.0kb upstream 1.0kb upstream 4614 true Chr05: 7007790-7012403 Populus trichocarpa
Potri.005G093700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 7007790-7008789 Populus trichocarpa
Potri.005G093700 1.0kb downstream 1.0kb downstream 4614 true Chr05: 7008790-7013403 Populus trichocarpa
Potri.005G093700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 7012404-7013403 Populus trichocarpa
Potri.005G093700 2.0kb upstream 2.0kb upstream 5614 true Chr05: 7006790-7012403 Populus trichocarpa
Potri.005G093700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 7006790-7008789 Populus trichocarpa
Potri.005G093700 2.0kb downstream 2.0kb downstream 5614 true Chr05: 7008790-7014403 Populus trichocarpa
Potri.005G093700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 7012404-7014403 Populus trichocarpa
Potri.005G093700 5.0kb upstream 5.0kb upstream 8614 true Chr05: 7003790-7012403 Populus trichocarpa
Potri.005G093700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 7003790-7008789 Populus trichocarpa
Potri.005G093700 5.0kb downstream 5.0kb downstream 8614 true Chr05: 7008790-7017403 Populus trichocarpa
Potri.005G093700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 7012404-7017403 Populus trichocarpa
Potri.005G093700 10.0kb upstream 10.0kb upstream 13614 true Chr05: 6998790-7012403 Populus trichocarpa
Potri.005G093700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 6998790-7008789 Populus trichocarpa
Potri.005G093700 10.0kb downstream 10.0kb downstream 13614 true Chr05: 7008790-7022403 Populus trichocarpa
Potri.005G093700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 7012404-7022403 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.168        
cufflinks 0.994        
cufflinks 1.107        
cufflinks 0.698       Low
cufflinks 1.235        
cufflinks 1.234        
cufflinks 0.888        
cufflinks 0.836        
cufflinks 1.178        
cufflinks 1.158        
cufflinks 1.34       High
cufflinks 1.097        
cufflinks 1.153        
cufflinks 1.061        
cufflinks 0.883        
cufflinks 0.828       Low
cufflinks 2.253       High
cufflinks 1.021        
cufflinks 0.839        
cufflinks 1.039        
cufflinks 0.841        
cufflinks 0.829        
cufflinks 1.184        
cufflinks 0.982        
cufflinks 5.543        
cufflinks 3.312        
cufflinks 3.483        
cufflinks 6.879       High
cufflinks 6.895       High
cufflinks 4.232        

0 Strain