Gene : Potri.005G198400 P. trichocarpa v3.0
Defline:  (1 of 1) 2.4.2.8 - Hypoxanthine phosphoribosyltransferase / Transphosphoribosidase Genomic Order:  1984
Name:  ? Potri.005G198400 Secondary Identifier:  ? PAC:27028229
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6599 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6609 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G198400 0.5kb upstream 0.5kb upstream 5238 true Chr05: 21433980-21439217 Populus trichocarpa
Potri.005G198400 0.5kb upstream 0.5kb upstream 500 false Chr05: 21438718-21439217 Populus trichocarpa
Potri.005G198400 0.5kb downstream 0.5kb downstream 5238 true Chr05: 21433480-21438717 Populus trichocarpa
Potri.005G198400 0.5kb downstream 0.5kb downstream 500 false Chr05: 21433480-21433979 Populus trichocarpa
Potri.005G198400 1.0kb upstream 1.0kb upstream 5738 true Chr05: 21433980-21439717 Populus trichocarpa
Potri.005G198400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 21438718-21439717 Populus trichocarpa
Potri.005G198400 1.0kb downstream 1.0kb downstream 5738 true Chr05: 21432980-21438717 Populus trichocarpa
Potri.005G198400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 21432980-21433979 Populus trichocarpa
Potri.005G198400 2.0kb upstream 2.0kb upstream 6738 true Chr05: 21433980-21440717 Populus trichocarpa
Potri.005G198400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 21438718-21440717 Populus trichocarpa
Potri.005G198400 2.0kb downstream 2.0kb downstream 6738 true Chr05: 21431980-21438717 Populus trichocarpa
Potri.005G198400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 21431980-21433979 Populus trichocarpa
Potri.005G198400 5.0kb upstream 5.0kb upstream 9738 true Chr05: 21433980-21443717 Populus trichocarpa
Potri.005G198400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 21438718-21443717 Populus trichocarpa
Potri.005G198400 5.0kb downstream 5.0kb downstream 9738 true Chr05: 21428980-21438717 Populus trichocarpa
Potri.005G198400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 21428980-21433979 Populus trichocarpa
Potri.005G198400 10.0kb upstream 10.0kb upstream 14738 true Chr05: 21433980-21448717 Populus trichocarpa
Potri.005G198400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 21438718-21448717 Populus trichocarpa
Potri.005G198400 10.0kb downstream 10.0kb downstream 14738 true Chr05: 21423980-21438717 Populus trichocarpa
Potri.005G198400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 21423980-21433979 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.792        
cufflinks 2.317        
cufflinks 3.272        
cufflinks 3.795        
cufflinks 6.859       High
cufflinks 3.971        
cufflinks 2.193        
cufflinks 2.124        
cufflinks 2.206        
cufflinks 2.271        
cufflinks 3.023        
cufflinks 3.03        
cufflinks 1.388       Low
cufflinks 2.227        
cufflinks 1.453       Low
cufflinks 1.6       Low
cufflinks 4.833       High
cufflinks 1.866        
cufflinks 2.908        
cufflinks 4.089       High
cufflinks 2.569        
cufflinks 1.718       Low
cufflinks 3.484        
cufflinks 2.616        
cufflinks 4.071       High
cufflinks 14.01        
cufflinks 12.452        
cufflinks 13.338        
cufflinks 9.211       Low
cufflinks 9.207       Low

0 Strain