Gene : Potri.T037400 P. trichocarpa v3.0
Defline:  (1 of 4) 6.1.1.4 - Leucine--tRNA ligase / Leucyl-tRNA synthetase Genomic Order:  3
Name:  ? Potri.T037400 Secondary Identifier:  ? PAC:26989072
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRNA-CHARGING-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.T037400 0.5kb upstream 0.5kb upstream 7089 true scaffold_38: 20097-27185 Populus trichocarpa
Potri.T037400 0.5kb upstream 0.5kb upstream 500 false scaffold_38: 20097-20596 Populus trichocarpa
Potri.T037400 0.5kb downstream 0.5kb downstream 7089 true scaffold_38: 20597-27685 Populus trichocarpa
Potri.T037400 0.5kb downstream 0.5kb downstream 500 false scaffold_38: 27186-27685 Populus trichocarpa
Potri.T037400 1.0kb upstream 1.0kb upstream 7589 true scaffold_38: 19597-27185 Populus trichocarpa
Potri.T037400 1.0kb upstream 1.0kb upstream 1000 false scaffold_38: 19597-20596 Populus trichocarpa
Potri.T037400 1.0kb downstream 1.0kb downstream 7589 true scaffold_38: 20597-28185 Populus trichocarpa
Potri.T037400 1.0kb downstream 1.0kb downstream 1000 false scaffold_38: 27186-28185 Populus trichocarpa
Potri.T037400 2.0kb upstream 2.0kb upstream 8589 true scaffold_38: 18597-27185 Populus trichocarpa
Potri.T037400 2.0kb upstream 2.0kb upstream 2000 false scaffold_38: 18597-20596 Populus trichocarpa
Potri.T037400 2.0kb downstream 2.0kb downstream 8589 true scaffold_38: 20597-29185 Populus trichocarpa
Potri.T037400 2.0kb downstream 2.0kb downstream 2000 false scaffold_38: 27186-29185 Populus trichocarpa
Potri.T037400 5.0kb upstream 5.0kb upstream 11589 true scaffold_38: 15597-27185 Populus trichocarpa
Potri.T037400 5.0kb upstream 5.0kb upstream 5000 false scaffold_38: 15597-20596 Populus trichocarpa
Potri.T037400 5.0kb downstream 5.0kb downstream 11589 true scaffold_38: 20597-32185 Populus trichocarpa
Potri.T037400 5.0kb downstream 5.0kb downstream 5000 false scaffold_38: 27186-32185 Populus trichocarpa
Potri.T037400 10.0kb upstream 10.0kb upstream 16589 true scaffold_38: 10597-27185 Populus trichocarpa
Potri.T037400 10.0kb upstream 10.0kb upstream 10000 false scaffold_38: 10597-20596 Populus trichocarpa
Potri.T037400 10.0kb downstream 10.0kb downstream 16589 true scaffold_38: 20597-37185 Populus trichocarpa
Potri.T037400 10.0kb downstream 10.0kb downstream 10000 false scaffold_38: 27186-37185 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.058     Low Low
cufflinks 0.154       Low
cufflinks 2.364       High
cufflinks 1.621       High
cufflinks 0.152       Low
cufflinks 0.842        
cufflinks 0.879        
cufflinks 0.668        
cufflinks 1.438        
cufflinks 0.396        
cufflinks 0.117     Low Low
cufflinks 1.416        
cufflinks 0.187        
cufflinks 1.923       High
cufflinks 1.868       High
cufflinks 0.835        
cufflinks 0.269        
cufflinks 0.161       Low
cufflinks 1.659       High
cufflinks 0.396        
cufflinks 0.106     Low Low
cufflinks 0.853        
cufflinks 0.181        
cufflinks 1.357        
cufflinks 1.167        
cufflinks 1.798       High
cufflinks 1.817       High
cufflinks 1.586        
cufflinks 1.12        
cufflinks 1.638       High

0 Strain