Gene : Potri.005G232200 P. trichocarpa v3.0
Defline:  (1 of 1) K07056 - 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] (rsmI) Genomic Order:  2322
Name:  ? Potri.005G232200 Secondary Identifier:  ? PAC:27028099
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G232200 0.5kb upstream 0.5kb upstream 5077 true Chr05: 24047270-24052346 Populus trichocarpa
Potri.005G232200 0.5kb upstream 0.5kb upstream 500 false Chr05: 24047270-24047769 Populus trichocarpa
Potri.005G232200 0.5kb downstream 0.5kb downstream 5077 true Chr05: 24047770-24052846 Populus trichocarpa
Potri.005G232200 0.5kb downstream 0.5kb downstream 500 false Chr05: 24052347-24052846 Populus trichocarpa
Potri.005G232200 1.0kb upstream 1.0kb upstream 5577 true Chr05: 24046770-24052346 Populus trichocarpa
Potri.005G232200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 24046770-24047769 Populus trichocarpa
Potri.005G232200 1.0kb downstream 1.0kb downstream 5577 true Chr05: 24047770-24053346 Populus trichocarpa
Potri.005G232200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 24052347-24053346 Populus trichocarpa
Potri.005G232200 2.0kb upstream 2.0kb upstream 6577 true Chr05: 24045770-24052346 Populus trichocarpa
Potri.005G232200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 24045770-24047769 Populus trichocarpa
Potri.005G232200 2.0kb downstream 2.0kb downstream 6577 true Chr05: 24047770-24054346 Populus trichocarpa
Potri.005G232200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 24052347-24054346 Populus trichocarpa
Potri.005G232200 5.0kb upstream 5.0kb upstream 9577 true Chr05: 24042770-24052346 Populus trichocarpa
Potri.005G232200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 24042770-24047769 Populus trichocarpa
Potri.005G232200 5.0kb downstream 5.0kb downstream 9577 true Chr05: 24047770-24057346 Populus trichocarpa
Potri.005G232200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 24052347-24057346 Populus trichocarpa
Potri.005G232200 10.0kb upstream 10.0kb upstream 14577 true Chr05: 24037770-24052346 Populus trichocarpa
Potri.005G232200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 24037770-24047769 Populus trichocarpa
Potri.005G232200 10.0kb downstream 10.0kb downstream 14577 true Chr05: 24047770-24062346 Populus trichocarpa
Potri.005G232200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 24052347-24062346 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.198        
cufflinks 0.636       Low
cufflinks 1.104        
cufflinks 1.741        
cufflinks 1.668        
cufflinks 1.038        
cufflinks 2.339       High
cufflinks 1.35        
cufflinks 2.471       High
cufflinks 0.564       Low
cufflinks 1.082        
cufflinks 1.226        
cufflinks 1.741        
cufflinks 0.715       Low
cufflinks 2.532       High
cufflinks 1.326        
cufflinks 1.257        
cufflinks 1.559        
cufflinks 0.674       Low
cufflinks 2.534       High
cufflinks 3.025       High
cufflinks 1.474        
cufflinks 1.297        
cufflinks 1.367        
cufflinks 1.934        
cufflinks 4.957        
cufflinks 6.346       High
cufflinks 5.925        
cufflinks 7.728       High
cufflinks 5.957        

0 Strain