Gene : Potri.T147100 P. trichocarpa v3.0
Defline:  (1 of 1) PF13481//PF13541 - AAA domain (AAA_25) // Subunit ChlI of Mg-chelatase (ChlI) Genomic Order:  1
Name:  ? Potri.T147100 Secondary Identifier:  ? PAC:27003364
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.T147100 0.5kb upstream 0.5kb upstream 7468 true scaffold_473: 20751-28218 Populus trichocarpa
Potri.T147100 0.5kb upstream 0.5kb upstream 500 false scaffold_473: 20751-21250 Populus trichocarpa
Potri.T147100 0.5kb downstream 0.5kb downstream 7468 true scaffold_473: 21251-28718 Populus trichocarpa
Potri.T147100 0.5kb downstream 0.5kb downstream 500 false scaffold_473: 28219-28718 Populus trichocarpa
Potri.T147100 1.0kb upstream 1.0kb upstream 7968 true scaffold_473: 20251-28218 Populus trichocarpa
Potri.T147100 1.0kb upstream 1.0kb upstream 1000 false scaffold_473: 20251-21250 Populus trichocarpa
Potri.T147100 1.0kb downstream 1.0kb downstream 7968 true scaffold_473: 21251-29218 Populus trichocarpa
Potri.T147100 1.0kb downstream 1.0kb downstream 1000 false scaffold_473: 28219-29218 Populus trichocarpa
Potri.T147100 2.0kb upstream 2.0kb upstream 8968 true scaffold_473: 19251-28218 Populus trichocarpa
Potri.T147100 2.0kb upstream 2.0kb upstream 2000 false scaffold_473: 19251-21250 Populus trichocarpa
Potri.T147100 2.0kb downstream 2.0kb downstream 8968 true scaffold_473: 21251-30218 Populus trichocarpa
Potri.T147100 2.0kb downstream 2.0kb downstream 2000 false scaffold_473: 28219-30218 Populus trichocarpa
Potri.T147100 5.0kb upstream 5.0kb upstream 11968 true scaffold_473: 16251-28218 Populus trichocarpa
Potri.T147100 5.0kb upstream 5.0kb upstream 5000 false scaffold_473: 16251-21250 Populus trichocarpa
Potri.T147100 5.0kb downstream 5.0kb downstream 11968 true scaffold_473: 21251-33218 Populus trichocarpa
Potri.T147100 5.0kb downstream 5.0kb downstream 5000 false scaffold_473: 28219-33218 Populus trichocarpa
Potri.T147100 10.0kb upstream 10.0kb upstream 16968 true scaffold_473: 11251-28218 Populus trichocarpa
Potri.T147100 10.0kb upstream 10.0kb upstream 10000 false scaffold_473: 11251-21250 Populus trichocarpa
Potri.T147100 10.0kb downstream 10.0kb downstream 12664 true scaffold_473: 21251-33914 Populus trichocarpa
Potri.T147100 10.0kb downstream 10.0kb downstream 5696 false scaffold_473: 28219-33914 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.329       Low
cufflinks 0.565        
cufflinks 0.681        
cufflinks 1.645       High
cufflinks 0.969        
cufflinks 1.034       High
cufflinks 0.609        
cufflinks 0.344       Low
cufflinks 1.238       High
cufflinks 0.829        
cufflinks 0.44        
cufflinks 0.691        
cufflinks 0.409        
cufflinks 0.798        
cufflinks 0.574        
cufflinks 0.473        
cufflinks 0.801        
cufflinks 0.192       Low
cufflinks 0.571        
cufflinks 0.755        
cufflinks 0.935        
cufflinks 0.282       Low
cufflinks 0.524        
cufflinks 0.844        
cufflinks 3.561        
cufflinks 2.956        
cufflinks 3.472        
cufflinks 5.501       High
cufflinks 7.202       High
cufflinks 3.213        

0 Strain