Gene : Potri.T142200 P. trichocarpa v3.0
Defline:  (1 of 4) K00574 - cyclopropane-fatty-acyl-phospholipid synthase (E2.1.1.79, cfa) Genomic Order:  1
Name:  ? Potri.T142200 Secondary Identifier:  ? PAC:27014121
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-4942 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.T142200 0.5kb upstream 0.5kb upstream 3427 true scaffold_381: 4567-7993 Populus trichocarpa
Potri.T142200 0.5kb upstream 0.5kb upstream 500 false scaffold_381: 7494-7993 Populus trichocarpa
Potri.T142200 0.5kb downstream 0.5kb downstream 3427 true scaffold_381: 4067-7493 Populus trichocarpa
Potri.T142200 0.5kb downstream 0.5kb downstream 500 false scaffold_381: 4067-4566 Populus trichocarpa
Potri.T142200 1.0kb upstream 1.0kb upstream 3927 true scaffold_381: 4567-8493 Populus trichocarpa
Potri.T142200 1.0kb upstream 1.0kb upstream 1000 false scaffold_381: 7494-8493 Populus trichocarpa
Potri.T142200 1.0kb downstream 1.0kb downstream 3927 true scaffold_381: 3567-7493 Populus trichocarpa
Potri.T142200 1.0kb downstream 1.0kb downstream 1000 false scaffold_381: 3567-4566 Populus trichocarpa
Potri.T142200 2.0kb upstream 2.0kb upstream 4927 true scaffold_381: 4567-9493 Populus trichocarpa
Potri.T142200 2.0kb upstream 2.0kb upstream 2000 false scaffold_381: 7494-9493 Populus trichocarpa
Potri.T142200 2.0kb downstream 2.0kb downstream 4927 true scaffold_381: 2567-7493 Populus trichocarpa
Potri.T142200 2.0kb downstream 2.0kb downstream 2000 false scaffold_381: 2567-4566 Populus trichocarpa
Potri.T142200 5.0kb upstream 5.0kb upstream 7927 true scaffold_381: 4567-12493 Populus trichocarpa
Potri.T142200 5.0kb upstream 5.0kb upstream 5000 false scaffold_381: 7494-12493 Populus trichocarpa
Potri.T142200 5.0kb downstream 5.0kb downstream 7493 true scaffold_381: 1-7493 Populus trichocarpa
Potri.T142200 5.0kb downstream 5.0kb downstream 4566 false scaffold_381: 1-4566 Populus trichocarpa
Potri.T142200 10.0kb upstream 10.0kb upstream 12927 true scaffold_381: 4567-17493 Populus trichocarpa
Potri.T142200 10.0kb upstream 10.0kb upstream 10000 false scaffold_381: 7494-17493 Populus trichocarpa
Potri.T142200 10.0kb downstream 10.0kb downstream 7493 true scaffold_381: 1-7493 Populus trichocarpa
Potri.T142200 10.0kb downstream 10.0kb downstream 4566 false scaffold_381: 1-4566 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.526       High
cufflinks 1.89        
cufflinks 10.341     High High
cufflinks 4.193        
cufflinks 1.457        
cufflinks 2.809        
cufflinks 1.283        
cufflinks 1.923        
cufflinks 2.131        
cufflinks 2.435        
cufflinks 0.325       Low
cufflinks 3.069        
cufflinks 2.678        
cufflinks 3.192        
cufflinks 0.472       Low
cufflinks 0.066     Low Low
cufflinks 0.473       Low
cufflinks 5.654       High
cufflinks 3.393        
cufflinks 1.381        
cufflinks 0.615        
cufflinks 0.291       Low
cufflinks 2.998        
cufflinks 0.757        
cufflinks 3.884        
cufflinks 3.11        
cufflinks 2.821        
cufflinks 3.987        
cufflinks 3.788        
cufflinks 2.845        

0 Strain