Gene : Potri.T062200 P. trichocarpa v3.0
Defline:  (1 of 15) K00422 - polyphenol oxidase (E1.10.3.1) Genomic Order:  4
Name:  ? Potri.T062200 Secondary Identifier:  ? PAC:27051338
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6752 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.T062200 0.5kb upstream 0.5kb upstream 2447 true scaffold_64: 169928-172374 Populus trichocarpa
Potri.T062200 0.5kb upstream 0.5kb upstream 500 false scaffold_64: 171875-172374 Populus trichocarpa
Potri.T062200 0.5kb downstream 0.5kb downstream 2447 true scaffold_64: 169428-171874 Populus trichocarpa
Potri.T062200 0.5kb downstream 0.5kb downstream 500 false scaffold_64: 169428-169927 Populus trichocarpa
Potri.T062200 1.0kb upstream 1.0kb upstream 2947 true scaffold_64: 169928-172874 Populus trichocarpa
Potri.T062200 1.0kb upstream 1.0kb upstream 1000 false scaffold_64: 171875-172874 Populus trichocarpa
Potri.T062200 1.0kb downstream 1.0kb downstream 2947 true scaffold_64: 168928-171874 Populus trichocarpa
Potri.T062200 1.0kb downstream 1.0kb downstream 1000 false scaffold_64: 168928-169927 Populus trichocarpa
Potri.T062200 2.0kb upstream 2.0kb upstream 3947 true scaffold_64: 169928-173874 Populus trichocarpa
Potri.T062200 2.0kb upstream 2.0kb upstream 2000 false scaffold_64: 171875-173874 Populus trichocarpa
Potri.T062200 2.0kb downstream 2.0kb downstream 3947 true scaffold_64: 167928-171874 Populus trichocarpa
Potri.T062200 2.0kb downstream 2.0kb downstream 2000 false scaffold_64: 167928-169927 Populus trichocarpa
Potri.T062200 5.0kb upstream 5.0kb upstream 6947 true scaffold_64: 169928-176874 Populus trichocarpa
Potri.T062200 5.0kb upstream 5.0kb upstream 5000 false scaffold_64: 171875-176874 Populus trichocarpa
Potri.T062200 5.0kb downstream 5.0kb downstream 6947 true scaffold_64: 164928-171874 Populus trichocarpa
Potri.T062200 5.0kb downstream 5.0kb downstream 5000 false scaffold_64: 164928-169927 Populus trichocarpa
Potri.T062200 10.0kb upstream 10.0kb upstream 8739 true scaffold_64: 169928-178666 Populus trichocarpa
Potri.T062200 10.0kb upstream 10.0kb upstream 6792 false scaffold_64: 171875-178666 Populus trichocarpa
Potri.T062200 10.0kb downstream 10.0kb downstream 11947 true scaffold_64: 159928-171874 Populus trichocarpa
Potri.T062200 10.0kb downstream 10.0kb downstream 10000 false scaffold_64: 159928-169927 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.997        
cufflinks 2.016        
cufflinks 2.878        
cufflinks 7.541        
cufflinks 5.791        
cufflinks 126.04     High High
cufflinks 3.218        
cufflinks 9.759        
cufflinks 47.176     High High
cufflinks 1.034        
cufflinks 0.58       Low
cufflinks 0.576       Low
cufflinks 5.159        
cufflinks 0.039     Low Low
cufflinks 1.118        
cufflinks 20.465     High  
cufflinks 10.186     High  
cufflinks 0.628       Low
cufflinks 3.213        
cufflinks 3.124        
cufflinks 102.468     High High
cufflinks 2.201        
cufflinks 60.98     High High
cufflinks 12.501     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low  
cufflinks 0.266     Low  
cufflinks 0.126     Low  
cufflinks 7.806       High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain