Gene : Potri.005G122400 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR23241//PTHR23241:SF62 - LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1224
Name:  ? Potri.005G122400 Secondary Identifier:  ? PAC:27031280
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G122400 0.5kb upstream 0.5kb upstream 3696 true Chr05: 9517861-9521556 Populus trichocarpa
Potri.005G122400 0.5kb upstream 0.5kb upstream 500 false Chr05: 9517861-9518360 Populus trichocarpa
Potri.005G122400 0.5kb downstream 0.5kb downstream 3696 true Chr05: 9518361-9522056 Populus trichocarpa
Potri.005G122400 0.5kb downstream 0.5kb downstream 500 false Chr05: 9521557-9522056 Populus trichocarpa
Potri.005G122400 1.0kb upstream 1.0kb upstream 4196 true Chr05: 9517361-9521556 Populus trichocarpa
Potri.005G122400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 9517361-9518360 Populus trichocarpa
Potri.005G122400 1.0kb downstream 1.0kb downstream 4196 true Chr05: 9518361-9522556 Populus trichocarpa
Potri.005G122400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 9521557-9522556 Populus trichocarpa
Potri.005G122400 2.0kb upstream 2.0kb upstream 5196 true Chr05: 9516361-9521556 Populus trichocarpa
Potri.005G122400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 9516361-9518360 Populus trichocarpa
Potri.005G122400 2.0kb downstream 2.0kb downstream 5196 true Chr05: 9518361-9523556 Populus trichocarpa
Potri.005G122400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 9521557-9523556 Populus trichocarpa
Potri.005G122400 5.0kb upstream 5.0kb upstream 8196 true Chr05: 9513361-9521556 Populus trichocarpa
Potri.005G122400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 9513361-9518360 Populus trichocarpa
Potri.005G122400 5.0kb downstream 5.0kb downstream 8196 true Chr05: 9518361-9526556 Populus trichocarpa
Potri.005G122400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 9521557-9526556 Populus trichocarpa
Potri.005G122400 10.0kb upstream 10.0kb upstream 13196 true Chr05: 9508361-9521556 Populus trichocarpa
Potri.005G122400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 9508361-9518360 Populus trichocarpa
Potri.005G122400 10.0kb downstream 10.0kb downstream 13196 true Chr05: 9518361-9531556 Populus trichocarpa
Potri.005G122400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 9521557-9531556 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 74.695     High High
cufflinks 0.036     Low Low
cufflinks 0.012     Low Low
cufflinks 1.048        
cufflinks 9.651       High
cufflinks 0.185        
cufflinks 0.04     Low Low
cufflinks 0.557        
cufflinks 0.599        
cufflinks 0.07     Low  
cufflinks 46.625     High High
cufflinks 1.758        
cufflinks 1.256        
cufflinks 4.41        
cufflinks 0.14        
cufflinks 0.733        
cufflinks 0.011     Low Low
cufflinks 0.294        
cufflinks 0.858        
cufflinks 0.573        
cufflinks 0.138     Low  
cufflinks 7.153        
cufflinks 64.843     High High
cufflinks 1.496        
cufflinks 7.936        
cufflinks 0.486       Low
cufflinks 0.652       Low
cufflinks 7.918        
cufflinks 5.658        
cufflinks 2.563        

0 Strain