Gene : Potri.005G231400 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR33510:SF6 - PROTEIN TIC 20-I, CHLOROPLASTIC Genomic Order:  2314
Name:  ? Potri.005G231400 Secondary Identifier:  ? PAC:27030169
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G231400 0.5kb upstream 0.5kb upstream 2862 true Chr05: 24006310-24009171 Populus trichocarpa
Potri.005G231400 0.5kb upstream 0.5kb upstream 500 false Chr05: 24008672-24009171 Populus trichocarpa
Potri.005G231400 0.5kb downstream 0.5kb downstream 2862 true Chr05: 24005810-24008671 Populus trichocarpa
Potri.005G231400 0.5kb downstream 0.5kb downstream 500 false Chr05: 24005810-24006309 Populus trichocarpa
Potri.005G231400 1.0kb upstream 1.0kb upstream 3362 true Chr05: 24006310-24009671 Populus trichocarpa
Potri.005G231400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 24008672-24009671 Populus trichocarpa
Potri.005G231400 1.0kb downstream 1.0kb downstream 3362 true Chr05: 24005310-24008671 Populus trichocarpa
Potri.005G231400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 24005310-24006309 Populus trichocarpa
Potri.005G231400 2.0kb upstream 2.0kb upstream 4362 true Chr05: 24006310-24010671 Populus trichocarpa
Potri.005G231400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 24008672-24010671 Populus trichocarpa
Potri.005G231400 2.0kb downstream 2.0kb downstream 4362 true Chr05: 24004310-24008671 Populus trichocarpa
Potri.005G231400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 24004310-24006309 Populus trichocarpa
Potri.005G231400 5.0kb upstream 5.0kb upstream 7362 true Chr05: 24006310-24013671 Populus trichocarpa
Potri.005G231400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 24008672-24013671 Populus trichocarpa
Potri.005G231400 5.0kb downstream 5.0kb downstream 7362 true Chr05: 24001310-24008671 Populus trichocarpa
Potri.005G231400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 24001310-24006309 Populus trichocarpa
Potri.005G231400 10.0kb upstream 10.0kb upstream 12362 true Chr05: 24006310-24018671 Populus trichocarpa
Potri.005G231400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 24008672-24018671 Populus trichocarpa
Potri.005G231400 10.0kb downstream 10.0kb downstream 12362 true Chr05: 23996310-24008671 Populus trichocarpa
Potri.005G231400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 23996310-24006309 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.565       Low
cufflinks 2.779       Low
cufflinks 11.695     High High
cufflinks 4.723        
cufflinks 2.313       Low
cufflinks 6.758        
cufflinks 3.719        
cufflinks 9.279     High  
cufflinks 3.506        
cufflinks 8.014        
cufflinks 21.202     High High
cufflinks 11.657     High High
cufflinks 7.883        
cufflinks 3.314        
cufflinks 4.19        
cufflinks 7.525        
cufflinks 3.393        
cufflinks 9.871     High  
cufflinks 3.55        
cufflinks 9.223     High  
cufflinks 8.732        
cufflinks 4.234        
cufflinks 10.911     High High
cufflinks 6.517        
cufflinks 31.671     High  
cufflinks 51.45     High High
cufflinks 66.374     High High
cufflinks 40.371     High  
cufflinks 51.507     High High
cufflinks 31.344     High  

0 Strain