Gene : Potri.005G225700 P. trichocarpa v3.0
Defline:  (1 of 2) 5.3.1.13 - Arabinose-5-phosphate isomerase / Phosphoarabinoisomerase Genomic Order:  2257
Name:  ? Potri.005G225700 Secondary Identifier:  ? PAC:27030198
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1269 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G225700 0.5kb upstream 0.5kb upstream 2405 true Chr05: 23588459-23590863 Populus trichocarpa
Potri.005G225700 0.5kb upstream 0.5kb upstream 500 false Chr05: 23588459-23588958 Populus trichocarpa
Potri.005G225700 0.5kb downstream 0.5kb downstream 2405 true Chr05: 23588959-23591363 Populus trichocarpa
Potri.005G225700 0.5kb downstream 0.5kb downstream 500 false Chr05: 23590864-23591363 Populus trichocarpa
Potri.005G225700 1.0kb upstream 1.0kb upstream 2905 true Chr05: 23587959-23590863 Populus trichocarpa
Potri.005G225700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 23587959-23588958 Populus trichocarpa
Potri.005G225700 1.0kb downstream 1.0kb downstream 2905 true Chr05: 23588959-23591863 Populus trichocarpa
Potri.005G225700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 23590864-23591863 Populus trichocarpa
Potri.005G225700 2.0kb upstream 2.0kb upstream 3905 true Chr05: 23586959-23590863 Populus trichocarpa
Potri.005G225700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 23586959-23588958 Populus trichocarpa
Potri.005G225700 2.0kb downstream 2.0kb downstream 3905 true Chr05: 23588959-23592863 Populus trichocarpa
Potri.005G225700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 23590864-23592863 Populus trichocarpa
Potri.005G225700 5.0kb upstream 5.0kb upstream 6905 true Chr05: 23583959-23590863 Populus trichocarpa
Potri.005G225700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 23583959-23588958 Populus trichocarpa
Potri.005G225700 5.0kb downstream 5.0kb downstream 6905 true Chr05: 23588959-23595863 Populus trichocarpa
Potri.005G225700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 23590864-23595863 Populus trichocarpa
Potri.005G225700 10.0kb upstream 10.0kb upstream 11905 true Chr05: 23578959-23590863 Populus trichocarpa
Potri.005G225700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 23578959-23588958 Populus trichocarpa
Potri.005G225700 10.0kb downstream 10.0kb downstream 11905 true Chr05: 23588959-23600863 Populus trichocarpa
Potri.005G225700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 23590864-23600863 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.17       High
cufflinks 5.478        
cufflinks 5.111        
cufflinks 3.632        
cufflinks 2.248       Low
cufflinks 3.176       Low
cufflinks 2.774       Low
cufflinks 5.236        
cufflinks 8.828     High High
cufflinks 3.813        
cufflinks 6.414       High
cufflinks 4.766        
cufflinks 5.196        
cufflinks 3.091       Low
cufflinks 3.369        
cufflinks 4.358        
cufflinks 3.517        
cufflinks 4.076        
cufflinks 6.552       High
cufflinks 5.257        
cufflinks 5.076        
cufflinks 4.341        
cufflinks 3.497        
cufflinks 3.979        
cufflinks 3.3        
cufflinks 2.738        
cufflinks 4.964        
cufflinks 3.43        
cufflinks 10.014       High
cufflinks 3.263        

0 Strain