Gene : Potri.005G034600 P. trichocarpa v3.0
Defline:  (1 of 4) 2.7.1.36 - Mevalonate kinase Genomic Order:  346
Name:  ? Potri.005G034600 Secondary Identifier:  ? PAC:27030294
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-922 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5910 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G034600 0.5kb upstream 0.5kb upstream 4405 true Chr05: 2558034-2562438 Populus trichocarpa
Potri.005G034600 0.5kb upstream 0.5kb upstream 500 false Chr05: 2561939-2562438 Populus trichocarpa
Potri.005G034600 0.5kb downstream 0.5kb downstream 4405 true Chr05: 2557534-2561938 Populus trichocarpa
Potri.005G034600 0.5kb downstream 0.5kb downstream 500 false Chr05: 2557534-2558033 Populus trichocarpa
Potri.005G034600 1.0kb upstream 1.0kb upstream 4905 true Chr05: 2558034-2562938 Populus trichocarpa
Potri.005G034600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2561939-2562938 Populus trichocarpa
Potri.005G034600 1.0kb downstream 1.0kb downstream 4905 true Chr05: 2557034-2561938 Populus trichocarpa
Potri.005G034600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2557034-2558033 Populus trichocarpa
Potri.005G034600 2.0kb upstream 2.0kb upstream 5905 true Chr05: 2558034-2563938 Populus trichocarpa
Potri.005G034600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2561939-2563938 Populus trichocarpa
Potri.005G034600 2.0kb downstream 2.0kb downstream 5905 true Chr05: 2556034-2561938 Populus trichocarpa
Potri.005G034600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2556034-2558033 Populus trichocarpa
Potri.005G034600 5.0kb upstream 5.0kb upstream 8905 true Chr05: 2558034-2566938 Populus trichocarpa
Potri.005G034600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2561939-2566938 Populus trichocarpa
Potri.005G034600 5.0kb downstream 5.0kb downstream 8905 true Chr05: 2553034-2561938 Populus trichocarpa
Potri.005G034600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2553034-2558033 Populus trichocarpa
Potri.005G034600 10.0kb upstream 10.0kb upstream 13905 true Chr05: 2558034-2571938 Populus trichocarpa
Potri.005G034600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2561939-2571938 Populus trichocarpa
Potri.005G034600 10.0kb downstream 10.0kb downstream 13905 true Chr05: 2548034-2561938 Populus trichocarpa
Potri.005G034600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2548034-2558033 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.363        
cufflinks 0.518        
cufflinks 1.179       High
cufflinks 0.792        
cufflinks 0.669        
cufflinks 1.029       High
cufflinks 0.078     Low Low
cufflinks 0.356        
cufflinks 1.0       High
cufflinks 0.913        
cufflinks 0.668        
cufflinks 0.562        
cufflinks 0.46        
cufflinks 0.798        
cufflinks 0.526        
cufflinks 0.521        
cufflinks 0.59        
cufflinks 0.891        
cufflinks 0.902        
cufflinks 0.105     Low Low
cufflinks 0.53        
cufflinks 0.28        
cufflinks 0.199       Low
cufflinks 0.229       Low
cufflinks 0.3     Low  
cufflinks 0.465        
cufflinks 0.42     Low  
cufflinks 0.592       High
cufflinks 0.579       High
cufflinks 0.232     Low  

0 Strain