Gene : Potri.005G001200 P. trichocarpa v3.0
Defline:  (1 of 3) K01885 - glutamyl-tRNA synthetase (EARS, gltX) Genomic Order:  12
Name:  ? Potri.005G001200 Secondary Identifier:  ? PAC:27031313
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRNA-CHARGING-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-5918 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5188 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G001200 0.5kb upstream 0.5kb upstream 5140 true Chr05: 62562-67701 Populus trichocarpa
Potri.005G001200 0.5kb upstream 0.5kb upstream 500 false Chr05: 62562-63061 Populus trichocarpa
Potri.005G001200 0.5kb downstream 0.5kb downstream 5140 true Chr05: 63062-68201 Populus trichocarpa
Potri.005G001200 0.5kb downstream 0.5kb downstream 500 false Chr05: 67702-68201 Populus trichocarpa
Potri.005G001200 1.0kb upstream 1.0kb upstream 5640 true Chr05: 62062-67701 Populus trichocarpa
Potri.005G001200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 62062-63061 Populus trichocarpa
Potri.005G001200 1.0kb downstream 1.0kb downstream 5640 true Chr05: 63062-68701 Populus trichocarpa
Potri.005G001200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 67702-68701 Populus trichocarpa
Potri.005G001200 2.0kb upstream 2.0kb upstream 6640 true Chr05: 61062-67701 Populus trichocarpa
Potri.005G001200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 61062-63061 Populus trichocarpa
Potri.005G001200 2.0kb downstream 2.0kb downstream 6640 true Chr05: 63062-69701 Populus trichocarpa
Potri.005G001200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 67702-69701 Populus trichocarpa
Potri.005G001200 5.0kb upstream 5.0kb upstream 9640 true Chr05: 58062-67701 Populus trichocarpa
Potri.005G001200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 58062-63061 Populus trichocarpa
Potri.005G001200 5.0kb downstream 5.0kb downstream 9640 true Chr05: 63062-72701 Populus trichocarpa
Potri.005G001200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 67702-72701 Populus trichocarpa
Potri.005G001200 10.0kb upstream 10.0kb upstream 14640 true Chr05: 53062-67701 Populus trichocarpa
Potri.005G001200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 53062-63061 Populus trichocarpa
Potri.005G001200 10.0kb downstream 10.0kb downstream 14640 true Chr05: 63062-77701 Populus trichocarpa
Potri.005G001200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 67702-77701 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.695     High Low
cufflinks 21.041     High  
cufflinks 14.386     High  
cufflinks 28.81     High High
cufflinks 16.265     High  
cufflinks 20.757     High  
cufflinks 17.353     High  
cufflinks 15.148     High  
cufflinks 19.294     High  
cufflinks 22.609     High  
cufflinks 16.767     High  
cufflinks 18.685     High  
cufflinks 19.519     High  
cufflinks 10.848     High Low
cufflinks 18.44     High  
cufflinks 21.409     High  
cufflinks 14.586     High  
cufflinks 12.24     High Low
cufflinks 26.216     High High
cufflinks 14.385     High  
cufflinks 18.795     High  
cufflinks 14.156     High  
cufflinks 17.462     High  
cufflinks 24.009     High High
cufflinks 44.643     High  
cufflinks 29.081     High Low
cufflinks 36.342     High  
cufflinks 44.815     High  
cufflinks 54.78     High  
cufflinks 38.526     High  

0 Strain