Gene : Potri.T079700 P. trichocarpa v3.0
Defline:  (1 of 6) 1.10.3.2//1.10.3.3 - Laccase / Urishiol oxidase // L-ascorbate oxidase / Ascorbase Genomic Order:  6
Name:  ? Potri.T079700 Secondary Identifier:  ? PAC:27035708
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5466 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6824 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.T079700 0.5kb upstream 0.5kb upstream 2683 true scaffold_87: 50641-53323 Populus trichocarpa
Potri.T079700 0.5kb upstream 0.5kb upstream 500 false scaffold_87: 52824-53323 Populus trichocarpa
Potri.T079700 0.5kb downstream 0.5kb downstream 2683 true scaffold_87: 50141-52823 Populus trichocarpa
Potri.T079700 0.5kb downstream 0.5kb downstream 500 false scaffold_87: 50141-50640 Populus trichocarpa
Potri.T079700 1.0kb upstream 1.0kb upstream 3183 true scaffold_87: 50641-53823 Populus trichocarpa
Potri.T079700 1.0kb upstream 1.0kb upstream 1000 false scaffold_87: 52824-53823 Populus trichocarpa
Potri.T079700 1.0kb downstream 1.0kb downstream 3183 true scaffold_87: 49641-52823 Populus trichocarpa
Potri.T079700 1.0kb downstream 1.0kb downstream 1000 false scaffold_87: 49641-50640 Populus trichocarpa
Potri.T079700 2.0kb upstream 2.0kb upstream 4183 true scaffold_87: 50641-54823 Populus trichocarpa
Potri.T079700 2.0kb upstream 2.0kb upstream 2000 false scaffold_87: 52824-54823 Populus trichocarpa
Potri.T079700 2.0kb downstream 2.0kb downstream 4183 true scaffold_87: 48641-52823 Populus trichocarpa
Potri.T079700 2.0kb downstream 2.0kb downstream 2000 false scaffold_87: 48641-50640 Populus trichocarpa
Potri.T079700 5.0kb upstream 5.0kb upstream 7183 true scaffold_87: 50641-57823 Populus trichocarpa
Potri.T079700 5.0kb upstream 5.0kb upstream 5000 false scaffold_87: 52824-57823 Populus trichocarpa
Potri.T079700 5.0kb downstream 5.0kb downstream 7183 true scaffold_87: 45641-52823 Populus trichocarpa
Potri.T079700 5.0kb downstream 5.0kb downstream 5000 false scaffold_87: 45641-50640 Populus trichocarpa
Potri.T079700 10.0kb upstream 10.0kb upstream 12183 true scaffold_87: 50641-62823 Populus trichocarpa
Potri.T079700 10.0kb upstream 10.0kb upstream 10000 false scaffold_87: 52824-62823 Populus trichocarpa
Potri.T079700 10.0kb downstream 10.0kb downstream 12183 true scaffold_87: 40641-52823 Populus trichocarpa
Potri.T079700 10.0kb downstream 10.0kb downstream 10000 false scaffold_87: 40641-50640 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.288        
cufflinks 0.221        
cufflinks 0.074     Low Low
cufflinks 17.222     High High
cufflinks 46.914     High High
cufflinks 5.724        
cufflinks 1.832        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.434        
cufflinks 1.098        
cufflinks 0.08     Low Low
cufflinks 0.173     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.529        
cufflinks 4.372        
cufflinks 1.111        
cufflinks 2.892        
cufflinks 1.363        
cufflinks 0.085     Low Low
cufflinks 22.507     High High
cufflinks 0.539        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.136     Low Low
cufflinks 1.11        
cufflinks 0.025     Low Low
cufflinks 0.026     Low Low
cufflinks 0.977       High
cufflinks 0.081     Low  
cufflinks 0.381     Low  
cufflinks 0.017     Low Low

0 Strain