Gene : Potri.005G094600 P. trichocarpa v3.0
Defline:  (1 of 2) K12825 - splicing factor 3A subunit 1 (SF3A1, SAP114) Genomic Order:  946
Name:  ? Potri.005G094600 Secondary Identifier:  ? PAC:27028942
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G094600 0.5kb upstream 0.5kb upstream 4746 true Chr05: 7088857-7093602 Populus trichocarpa
Potri.005G094600 0.5kb upstream 0.5kb upstream 500 false Chr05: 7088857-7089356 Populus trichocarpa
Potri.005G094600 0.5kb downstream 0.5kb downstream 4746 true Chr05: 7089357-7094102 Populus trichocarpa
Potri.005G094600 0.5kb downstream 0.5kb downstream 500 false Chr05: 7093603-7094102 Populus trichocarpa
Potri.005G094600 1.0kb upstream 1.0kb upstream 5246 true Chr05: 7088357-7093602 Populus trichocarpa
Potri.005G094600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 7088357-7089356 Populus trichocarpa
Potri.005G094600 1.0kb downstream 1.0kb downstream 5246 true Chr05: 7089357-7094602 Populus trichocarpa
Potri.005G094600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 7093603-7094602 Populus trichocarpa
Potri.005G094600 2.0kb upstream 2.0kb upstream 6246 true Chr05: 7087357-7093602 Populus trichocarpa
Potri.005G094600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 7087357-7089356 Populus trichocarpa
Potri.005G094600 2.0kb downstream 2.0kb downstream 6246 true Chr05: 7089357-7095602 Populus trichocarpa
Potri.005G094600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 7093603-7095602 Populus trichocarpa
Potri.005G094600 5.0kb upstream 5.0kb upstream 9246 true Chr05: 7084357-7093602 Populus trichocarpa
Potri.005G094600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 7084357-7089356 Populus trichocarpa
Potri.005G094600 5.0kb downstream 5.0kb downstream 9246 true Chr05: 7089357-7098602 Populus trichocarpa
Potri.005G094600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 7093603-7098602 Populus trichocarpa
Potri.005G094600 10.0kb upstream 10.0kb upstream 14246 true Chr05: 7079357-7093602 Populus trichocarpa
Potri.005G094600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 7079357-7089356 Populus trichocarpa
Potri.005G094600 10.0kb downstream 10.0kb downstream 14246 true Chr05: 7089357-7103602 Populus trichocarpa
Potri.005G094600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 7093603-7103602 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.285       Low
cufflinks 1.488        
cufflinks 3.062       High
cufflinks 1.553        
cufflinks 1.449        
cufflinks 3.044       High
cufflinks 0.853       Low
cufflinks 1.4        
cufflinks 1.945        
cufflinks 1.553        
cufflinks 1.443        
cufflinks 2.515       High
cufflinks 1.948        
cufflinks 2.091        
cufflinks 2.046        
cufflinks 2.017        
cufflinks 1.3       Low
cufflinks 1.945        
cufflinks 1.589        
cufflinks 2.154        
cufflinks 1.528        
cufflinks 2.891       High
cufflinks 1.912        
cufflinks 2.072        
cufflinks 34.12     High  
cufflinks 58.271     High High
cufflinks 50.082     High  
cufflinks 63.553     High High
cufflinks 37.256     High  
cufflinks 48.275     High  

0 Strain