Gene : Potri.T079500 P. trichocarpa v3.0
Defline:  (1 of 6) 1.10.3.2//1.10.3.3 - Laccase / Urishiol oxidase // L-ascorbate oxidase / Ascorbase Genomic Order:  4
Name:  ? Potri.T079500 Secondary Identifier:  ? PAC:27035707
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5466 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6824 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.T079500 0.5kb upstream 0.5kb upstream 2965 true scaffold_87: 39187-42151 Populus trichocarpa
Potri.T079500 0.5kb upstream 0.5kb upstream 500 false scaffold_87: 41652-42151 Populus trichocarpa
Potri.T079500 0.5kb downstream 0.5kb downstream 2965 true scaffold_87: 38687-41651 Populus trichocarpa
Potri.T079500 0.5kb downstream 0.5kb downstream 500 false scaffold_87: 38687-39186 Populus trichocarpa
Potri.T079500 1.0kb upstream 1.0kb upstream 3465 true scaffold_87: 39187-42651 Populus trichocarpa
Potri.T079500 1.0kb upstream 1.0kb upstream 1000 false scaffold_87: 41652-42651 Populus trichocarpa
Potri.T079500 1.0kb downstream 1.0kb downstream 3465 true scaffold_87: 38187-41651 Populus trichocarpa
Potri.T079500 1.0kb downstream 1.0kb downstream 1000 false scaffold_87: 38187-39186 Populus trichocarpa
Potri.T079500 2.0kb upstream 2.0kb upstream 4465 true scaffold_87: 39187-43651 Populus trichocarpa
Potri.T079500 2.0kb upstream 2.0kb upstream 2000 false scaffold_87: 41652-43651 Populus trichocarpa
Potri.T079500 2.0kb downstream 2.0kb downstream 4465 true scaffold_87: 37187-41651 Populus trichocarpa
Potri.T079500 2.0kb downstream 2.0kb downstream 2000 false scaffold_87: 37187-39186 Populus trichocarpa
Potri.T079500 5.0kb upstream 5.0kb upstream 7465 true scaffold_87: 39187-46651 Populus trichocarpa
Potri.T079500 5.0kb upstream 5.0kb upstream 5000 false scaffold_87: 41652-46651 Populus trichocarpa
Potri.T079500 5.0kb downstream 5.0kb downstream 7465 true scaffold_87: 34187-41651 Populus trichocarpa
Potri.T079500 5.0kb downstream 5.0kb downstream 5000 false scaffold_87: 34187-39186 Populus trichocarpa
Potri.T079500 10.0kb upstream 10.0kb upstream 12465 true scaffold_87: 39187-51651 Populus trichocarpa
Potri.T079500 10.0kb upstream 10.0kb upstream 10000 false scaffold_87: 41652-51651 Populus trichocarpa
Potri.T079500 10.0kb downstream 10.0kb downstream 12465 true scaffold_87: 29187-41651 Populus trichocarpa
Potri.T079500 10.0kb downstream 10.0kb downstream 10000 false scaffold_87: 29187-39186 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.309        
cufflinks 0.365        
cufflinks 2.35        
cufflinks 0.153        
cufflinks 15.407     High High
cufflinks 0.233        
cufflinks 0.23        
cufflinks 0.242        
cufflinks 0.145     Low  
cufflinks 0.276        
cufflinks 0.24        
cufflinks 0.305        
cufflinks 0.148     Low  
cufflinks 4.032       High
cufflinks 0.183        
cufflinks 8.471       High
cufflinks 1.497        
cufflinks 0.28        
cufflinks 21.678     High High
cufflinks 0.565        
cufflinks 0.34        
cufflinks 0.68        
cufflinks 0.18        
cufflinks 0.504        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.159     Low High
cufflinks 0.022     Low Low
cufflinks 0.089     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain