Gene : Potri.005G178100 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR31580:SF2 - FILAMENT-LIKE PLANT PROTEIN 1-RELATED Genomic Order:  1781
Name:  ? Potri.005G178100 Secondary Identifier:  ? PAC:27029531
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G178100 0.5kb upstream 0.5kb upstream 4532 true Chr05: 19416890-19421421 Populus trichocarpa
Potri.005G178100 0.5kb upstream 0.5kb upstream 500 false Chr05: 19416890-19417389 Populus trichocarpa
Potri.005G178100 0.5kb downstream 0.5kb downstream 4532 true Chr05: 19417390-19421921 Populus trichocarpa
Potri.005G178100 0.5kb downstream 0.5kb downstream 500 false Chr05: 19421422-19421921 Populus trichocarpa
Potri.005G178100 1.0kb upstream 1.0kb upstream 5032 true Chr05: 19416390-19421421 Populus trichocarpa
Potri.005G178100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 19416390-19417389 Populus trichocarpa
Potri.005G178100 1.0kb downstream 1.0kb downstream 5032 true Chr05: 19417390-19422421 Populus trichocarpa
Potri.005G178100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 19421422-19422421 Populus trichocarpa
Potri.005G178100 2.0kb upstream 2.0kb upstream 6032 true Chr05: 19415390-19421421 Populus trichocarpa
Potri.005G178100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 19415390-19417389 Populus trichocarpa
Potri.005G178100 2.0kb downstream 2.0kb downstream 6032 true Chr05: 19417390-19423421 Populus trichocarpa
Potri.005G178100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 19421422-19423421 Populus trichocarpa
Potri.005G178100 5.0kb upstream 5.0kb upstream 9032 true Chr05: 19412390-19421421 Populus trichocarpa
Potri.005G178100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 19412390-19417389 Populus trichocarpa
Potri.005G178100 5.0kb downstream 5.0kb downstream 9032 true Chr05: 19417390-19426421 Populus trichocarpa
Potri.005G178100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 19421422-19426421 Populus trichocarpa
Potri.005G178100 10.0kb upstream 10.0kb upstream 14032 true Chr05: 19407390-19421421 Populus trichocarpa
Potri.005G178100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 19407390-19417389 Populus trichocarpa
Potri.005G178100 10.0kb downstream 10.0kb downstream 14032 true Chr05: 19417390-19431421 Populus trichocarpa
Potri.005G178100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 19421422-19431421 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.366       High
cufflinks 0.714        
cufflinks 0.417       Low
cufflinks 1.243        
cufflinks 0.401       Low
cufflinks 1.408        
cufflinks 0.74        
cufflinks 1.238        
cufflinks 1.222        
cufflinks 1.187        
cufflinks 0.761        
cufflinks 0.495        
cufflinks 0.602        
cufflinks 1.309        
cufflinks 0.45       Low
cufflinks 1.43        
cufflinks 1.545        
cufflinks 0.313       Low
cufflinks 0.734        
cufflinks 3.194       High
cufflinks 0.925        
cufflinks 0.441       Low
cufflinks 1.465        
cufflinks 0.959        
cufflinks 3.677        
cufflinks 1.66        
cufflinks 1.579        
cufflinks 4.414       High
cufflinks 2.907        
cufflinks 2.335        

0 Strain