Gene : Potri.005G154000 P. trichocarpa v3.0
Defline:  (1 of 5) PTHR30566//PTHR30566:SF12 - YNAI-RELATED MECHANOSENSITIVE ION CHANNEL // SUBFAMILY NOT NAMED Genomic Order:  1540
Name:  ? Potri.005G154000 Secondary Identifier:  ? PAC:27027973
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G154000 0.5kb upstream 0.5kb upstream 12795 true Chr05: 14699317-14712111 Populus trichocarpa
Potri.005G154000 0.5kb upstream 0.5kb upstream 500 false Chr05: 14711612-14712111 Populus trichocarpa
Potri.005G154000 0.5kb downstream 0.5kb downstream 12795 true Chr05: 14698817-14711611 Populus trichocarpa
Potri.005G154000 0.5kb downstream 0.5kb downstream 500 false Chr05: 14698817-14699316 Populus trichocarpa
Potri.005G154000 1.0kb upstream 1.0kb upstream 13295 true Chr05: 14699317-14712611 Populus trichocarpa
Potri.005G154000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 14711612-14712611 Populus trichocarpa
Potri.005G154000 1.0kb downstream 1.0kb downstream 13295 true Chr05: 14698317-14711611 Populus trichocarpa
Potri.005G154000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 14698317-14699316 Populus trichocarpa
Potri.005G154000 2.0kb upstream 2.0kb upstream 14295 true Chr05: 14699317-14713611 Populus trichocarpa
Potri.005G154000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 14711612-14713611 Populus trichocarpa
Potri.005G154000 2.0kb downstream 2.0kb downstream 14295 true Chr05: 14697317-14711611 Populus trichocarpa
Potri.005G154000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 14697317-14699316 Populus trichocarpa
Potri.005G154000 5.0kb upstream 5.0kb upstream 17295 true Chr05: 14699317-14716611 Populus trichocarpa
Potri.005G154000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 14711612-14716611 Populus trichocarpa
Potri.005G154000 5.0kb downstream 5.0kb downstream 17295 true Chr05: 14694317-14711611 Populus trichocarpa
Potri.005G154000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 14694317-14699316 Populus trichocarpa
Potri.005G154000 10.0kb upstream 10.0kb upstream 22295 true Chr05: 14699317-14721611 Populus trichocarpa
Potri.005G154000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 14711612-14721611 Populus trichocarpa
Potri.005G154000 10.0kb downstream 10.0kb downstream 22295 true Chr05: 14689317-14711611 Populus trichocarpa
Potri.005G154000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 14689317-14699316 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.221        
cufflinks 0.401       Low
cufflinks 1.675       High
cufflinks 1.317        
cufflinks 0.533       Low
cufflinks 1.17        
cufflinks 1.018        
cufflinks 0.749        
cufflinks 0.574       Low
cufflinks 0.858        
cufflinks 0.858        
cufflinks 1.186        
cufflinks 1.062        
cufflinks 1.151        
cufflinks 0.978        
cufflinks 1.033        
cufflinks 1.019        
cufflinks 0.498       Low
cufflinks 1.825       High
cufflinks 1.182        
cufflinks 1.392        
cufflinks 1.325        
cufflinks 0.911        
cufflinks 1.485       High
cufflinks 13.441        
cufflinks 12.561        
cufflinks 14.62       High
cufflinks 14.538       High
cufflinks 11.532        
cufflinks 13.179        

0 Strain