Gene : Potri.005G139800 P. trichocarpa v3.0
Defline:  (1 of 2) 6.3.4.21 - Nicotinate phosphoribosyltransferase / Nicotinic acid phosphoribosyltransferase Genomic Order:  1398
Name:  ? Potri.005G139800 Secondary Identifier:  ? PAC:27030053
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5381 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G139800 0.5kb upstream 0.5kb upstream 11097 true Chr05: 11663620-11674716 Populus trichocarpa
Potri.005G139800 0.5kb upstream 0.5kb upstream 500 false Chr05: 11663620-11664119 Populus trichocarpa
Potri.005G139800 0.5kb downstream 0.5kb downstream 11097 true Chr05: 11664120-11675216 Populus trichocarpa
Potri.005G139800 0.5kb downstream 0.5kb downstream 500 false Chr05: 11674717-11675216 Populus trichocarpa
Potri.005G139800 1.0kb upstream 1.0kb upstream 11597 true Chr05: 11663120-11674716 Populus trichocarpa
Potri.005G139800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 11663120-11664119 Populus trichocarpa
Potri.005G139800 1.0kb downstream 1.0kb downstream 11597 true Chr05: 11664120-11675716 Populus trichocarpa
Potri.005G139800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 11674717-11675716 Populus trichocarpa
Potri.005G139800 2.0kb upstream 2.0kb upstream 12597 true Chr05: 11662120-11674716 Populus trichocarpa
Potri.005G139800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 11662120-11664119 Populus trichocarpa
Potri.005G139800 2.0kb downstream 2.0kb downstream 12597 true Chr05: 11664120-11676716 Populus trichocarpa
Potri.005G139800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 11674717-11676716 Populus trichocarpa
Potri.005G139800 5.0kb upstream 5.0kb upstream 15597 true Chr05: 11659120-11674716 Populus trichocarpa
Potri.005G139800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 11659120-11664119 Populus trichocarpa
Potri.005G139800 5.0kb downstream 5.0kb downstream 15597 true Chr05: 11664120-11679716 Populus trichocarpa
Potri.005G139800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 11674717-11679716 Populus trichocarpa
Potri.005G139800 10.0kb upstream 10.0kb upstream 20597 true Chr05: 11654120-11674716 Populus trichocarpa
Potri.005G139800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 11654120-11664119 Populus trichocarpa
Potri.005G139800 10.0kb downstream 10.0kb downstream 20597 true Chr05: 11664120-11684716 Populus trichocarpa
Potri.005G139800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 11674717-11684716 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.543       Low
cufflinks 3.849        
cufflinks 4.287        
cufflinks 4.507        
cufflinks 4.094        
cufflinks 5.439       High
cufflinks 4.056        
cufflinks 4.133        
cufflinks 3.352       Low
cufflinks 4.837        
cufflinks 4.613        
cufflinks 4.038        
cufflinks 4.144        
cufflinks 5.44       High
cufflinks 5.463       High
cufflinks 3.625        
cufflinks 3.441       Low
cufflinks 5.75       High
cufflinks 4.368        
cufflinks 4.91        
cufflinks 4.14        
cufflinks 3.303       Low
cufflinks 3.585        
cufflinks 3.672        
cufflinks 18.845       High
cufflinks 17.825        
cufflinks 15.627        
cufflinks 16.477        
cufflinks 18.058       High
cufflinks 16.395        

0 Strain