Gene : Potri.005G107600 P. trichocarpa v3.0
Defline:  (1 of 1) K03006 - DNA-directed RNA polymerase II subunit RPB1 (RPB1, POLR2A) Genomic Order:  1076
Name:  ? Potri.005G107600 Secondary Identifier:  ? PAC:27027561
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Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G107600 0.5kb upstream 0.5kb upstream 9825 true Chr05: 8211359-8221183 Populus trichocarpa
Potri.005G107600 0.5kb upstream 0.5kb upstream 500 false Chr05: 8220684-8221183 Populus trichocarpa
Potri.005G107600 0.5kb downstream 0.5kb downstream 9825 true Chr05: 8210859-8220683 Populus trichocarpa
Potri.005G107600 0.5kb downstream 0.5kb downstream 500 false Chr05: 8210859-8211358 Populus trichocarpa
Potri.005G107600 1.0kb upstream 1.0kb upstream 10325 true Chr05: 8211359-8221683 Populus trichocarpa
Potri.005G107600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 8220684-8221683 Populus trichocarpa
Potri.005G107600 1.0kb downstream 1.0kb downstream 10325 true Chr05: 8210359-8220683 Populus trichocarpa
Potri.005G107600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 8210359-8211358 Populus trichocarpa
Potri.005G107600 2.0kb upstream 2.0kb upstream 11325 true Chr05: 8211359-8222683 Populus trichocarpa
Potri.005G107600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 8220684-8222683 Populus trichocarpa
Potri.005G107600 2.0kb downstream 2.0kb downstream 11325 true Chr05: 8209359-8220683 Populus trichocarpa
Potri.005G107600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 8209359-8211358 Populus trichocarpa
Potri.005G107600 5.0kb upstream 5.0kb upstream 14325 true Chr05: 8211359-8225683 Populus trichocarpa
Potri.005G107600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 8220684-8225683 Populus trichocarpa
Potri.005G107600 5.0kb downstream 5.0kb downstream 14325 true Chr05: 8206359-8220683 Populus trichocarpa
Potri.005G107600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 8206359-8211358 Populus trichocarpa
Potri.005G107600 10.0kb upstream 10.0kb upstream 19325 true Chr05: 8211359-8230683 Populus trichocarpa
Potri.005G107600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 8220684-8230683 Populus trichocarpa
Potri.005G107600 10.0kb downstream 10.0kb downstream 19325 true Chr05: 8201359-8220683 Populus trichocarpa
Potri.005G107600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 8201359-8211358 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.969        
cufflinks 5.921        
cufflinks 11.058     High High
cufflinks 3.991        
cufflinks 8.1       High
cufflinks 8.623       High
cufflinks 5.688        
cufflinks 3.344        
cufflinks 3.376        
cufflinks 3.502        
cufflinks 5.128        
cufflinks 4.225        
cufflinks 4.208        
cufflinks 3.012        
cufflinks 4.109        
cufflinks 3.352        
cufflinks 3.745        
cufflinks 4.516        
cufflinks 2.921       Low
cufflinks 2.415       Low
cufflinks 3.873        
cufflinks 3.045        
cufflinks 5.236        
cufflinks 3.826        
cufflinks 43.993     High  
cufflinks 68.215     High High
cufflinks 56.825     High  
cufflinks 53.197     High  
cufflinks 40.892     High  
cufflinks 64.864     High High

0 Strain